Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco4g01458 ATGGCTTCTTCAATGAGAATCTCAAGGCTGCTCTCTCGTTCTTTCCTTCCTGCTTCCACTAATTCTTTGTTTTCTAGAGGTGGAAGTGGAGCTCTTGGTGGAGGACTCAGTAAATTCAGCACTGCTGCTGCCACTGAAGAACCAATTAAACCACCAGTTAGAGTAGAACACACCCAGCTCTTAATTGATGGAAAATTCGTTGATGCTGCTTCTGGGAAAACTTTTCCAACGTTGGACCCCAGGACAGGAGATGTGATTGCTCATGTTGCTGAGGGTGACCATGAAGATGTTGATCGAGCAGTTGCTGTTGCTCGCGAAGCCTTTGACCATGGACCTTGGCCAAAGATGACAGCCTATGAAAGACAAAGGATATTGCTGCGTGCTGCTGATCTGTTGGAAAAGCACAATGATGAGCTTGCTGCACTTGAGACATGGGATAATGGGAAGCCATATGAACAATCTGCTCAAATTGAAATCCCAATTGTGGTTCGCCTATTTCGATACTATGCTGGTTGGACGGATAAGATTCATGGTCTGACAGCTCCAGCTGATGGGCCACATCATCTGCAAACATTGCATGAACCTATTGGTGTGGCCGGTCAGATCATTCCATGGAACTTTCCTCTTCTCATGTTTGCCTGGAAGGTTTGCCCAGCATTGGCCTGTGGTAACACTGTTGTTATCAAAACAGCTGAGCAGACTCCTTTATCTGCTCTCTATGCATCAAAGTTGCTTCATGAGGCTGGACTTCCTCCTGGTGTCCTGAATGTCATATCTGGCTTTGGTCCAACTGCTGGTGCTGCCATTGCCAGTCACATGAACATAGACAAGCTTGCTTTCACTGGTTCAACCGACACTGGAAAAGTTGTCCTTGAACTGGCAGCTAAAAGTAATCTTAAGCCTGTTACTTTGGAGCTTGGTGGCAAATCCCCTTTTATTGTATGTGAAGATGCTGATGTAGATGAGGCTGTTGAGCAAGCACACTTTGCATTATTCTTTAATCAGGGACAATGCTGCTGTGCTGGTTCTAGAACATTTGTACACGAACGTGTGTACGATGAATTTATTGAGAAAGCAAGGGCACGTGCTTTGAAACGTGCTGTTGGTGATCCATTCAAAGGGGGAATAGAGCAAGGTCCTCAGATTGATTCAGAACAATTTCAGAAAATATTGAAGTATATTAGATCTGGTGTTGAAAGTGGAGCTACGCTTGAAACCGGAGGAGATAGATTTGGCAACTCCGGCTTCTATGTTCAACCTACTGTCTTCTCAAATGTAAAGGATGATATGCTGATTGCAAAGGAAGAGATCTTTGGCCCAGTTCAATCCATATTAAAGTTCAAGGAGCTTGATGAGGTGATTCACAGAGCAAATAACACACACTATGGCCTTGCAGCAGGGGTGTTCACAAAAAACATTAATACGGCAAACACTTTGACTAGAGCATTGAAAGTTGGAACAGTGTGGGTGAACTGCTTTGACGTATTTGATGCTGCAATTCCTTTTGGAGGGTACAAAATGAGTGGTCAAGGAAGAGAAAAAGGAGAATACAGTCTCAAGAACTACTTGCAAGTGAAGGCTGTTGTCACATCCTTGAAGAACCCAGCTTGGCTTTGA 1617 0.4428 MASSMRISRLLSRSFLPASTNSLFSRGGSGALGGGLSKFSTAAATEEPIKPPVRVEHTQLLIDGKFVDAASGKTFPTLDPRTGDVIAHVAEGDHEDVDRAVAVAREAFDHGPWPKMTAYERQRILLRAADLLEKHNDELAALETWDNGKPYEQSAQIEIPIVVRLFRYYAGWTDKIHGLTAPADGPHHLQTLHEPIGVAGQIIPWNFPLLMFAWKVCPALACGNTVVIKTAEQTPLSALYASKLLHEAGLPPGVLNVISGFGPTAGAAIASHMNIDKLAFTGSTDTGKVVLELAAKSNLKPVTLELGGKSPFIVCEDADVDEAVEQAHFALFFNQGQCCCAGSRTFVHERVYDEFIEKARARALKRAVGDPFKGGIEQGPQIDSEQFQKILKYIRSGVESGATLETGGDRFGNSGFYVQPTVFSNVKDDMLIAKEEIFGPVQSILKFKELDEVIHRANNTHYGLAAGVFTKNINTANTLTRALKVGTVWVNCFDVFDAAIPFGGYKMSGQGREKGEYSLKNYLQVKAVVTSLKNPAWL 538
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco4g01458 538 ProSitePatterns Aldehyde dehydrogenases glutamic acid active site. 304 311 IPR029510 GO:0016491
Phco4g01458 538 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 72 528 IPR016162 GO:0016491
Phco4g01458 538 CDD ALDH_F2BC 55 530 - -
Phco4g01458 538 SUPERFAMILY ALDH-like 54 532 IPR016161 GO:0016491
Phco4g01458 538 FunFam Mitochondrial aldehyde dehydrogenase 2 310 499 - -
Phco4g01458 538 FunFam Aldehyde dehydrogenase, putative 500 526 - -
Phco4g01458 538 FunFam ALD5p Mitochondrial aldehyde dehydrogenase 62 319 - -
Phco4g01458 538 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 310 499 IPR016163 GO:0016620
Phco4g01458 538 PANTHER ALDEHYDE DEHYDROGENASE-RELATED 44 528 - -
Phco4g01458 538 ProSitePatterns Aldehyde dehydrogenases cysteine active site. 332 343 IPR016160 GO:0016491
Phco4g01458 538 Pfam Aldehyde dehydrogenase family 66 528 IPR015590 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco4g01458 Phco-Chr4 12855826 12859295 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco4g01458 4 12855826 12859295 Phco4g01458 4 12855826 12859295 ECH