Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco4g01451 ATGAACGAACAACTCACGCTGCTCTGTCTCTTTATCCTCTTCTCATCTCTCAGTGTGAGCTTCGCCGCCGTCGGCGACGGAGAGAAAAACCCGTTCACGCCCAAAGCCTACGCGGTTCGCTATTGGGACAAAGAGATCCGCAGCACGCTGCCGAAGCCGCCGTTTCTTTTCTCCAAGGCGTCGCCGCTGAGCGCTGCGGAGTCGGCGGCGTTTGTGAAACTCGCCGGTCAGAACGCGCTAGACAAGCGGCTGCCGGAATTCTGCGCCGCCGCGAAGCTCCTCTGCTTCCCGGAGGTGGTGACCAGCCTCGAGAAGCACGACAAGGACGCGAACTTCGCTGTGTACAGAGACAAGAACTTCACCAACTACGGAACGGGTCGACCCGGTGGAGTGGACTCGTTCAAGAACTACTCCGAAGGGGAGAATATTCCGGTGAACGATTTCCGCCGCTACAGCAGGGACTCCGCCGGGCACAAGGACAATTTTTTGAGTTACGGCACCGAAGGGAACGTGGTGCAGCAGAGCTTTCACACCTACGGCGCCGGAGCCACAGGCGGCACCGGGGAGTTTAAGCGCTACTCCGACGAGACCAACGTCCCGAACCTCGATTTCACCTCCTACTCTGACGACGCAAACGGGAGAACTCAGTTGTTCTCTTCTTACTCAGAAAATGGCAATGCCGGAGAGCAAACGTTCTCCTCGTACGGTAAAAACGGCAACGGCCCGACCAACGCGTTCACCTCTTACGGGACAGAGTCCAACGTTGTGGGATCCGGGTTTTCCAACTACGCCGAAAACTCAAACGCCGCTAATGACACCTTCAAAGGCTACGGCGTCGACATGAACAACCCCACCAACACGTTCTCCAACTACGCCGCCGGCGGCAACGGCGCCGTCGAGAGGTTCTCCAATTACCGCGACAAGGCGAACGTTGGCGCCGACACCTTCACGTCGTACGCGAAATCCGCAAACGCCGGCGACATAGGTTTCAGCAACTACGGCAAATCCTTCAACGAAGGTACCGACACGTTCAGCTCGTACGCGAAATCCTCGAACGGCGAAACGAAGGTGGGTTTCACTTCCTACGGCGTGAACAACACCTTCAAGGAGTACTCAAAAGAAGGCCCCACTGTCTCGTTCGCGAAGTACACGAACGTGAGCACCACGCTGAGCGTATCGGATTCTGCGGCGAGTGGCAGGATGGTAAATAAGTGGGTGGAGCCGGGTAAATTCTTCAGGGAGAAGATGATGAAGGAAGGGACGGTGATGCCCATGCCTGACATAAGAGATAAAATGCCACAAAGGTCGTTTTTGCCCCGGAGCATTTTGTCTAAATTACCGTTTTCCGTTTCCAAGATGGACGACTTGAAGCGCGTGTTCCGAGCCTCCGATAACGGTTCCATGGAGAGGATGATGCGTGAGAGCTTAGAGGAATGCGAACGTGCGCCCAGTCGCGGCGAGACTAAACGGTGCGTTGGGTCTTTGGAGGACATGATCGACTTCGCCACATCCGTTTTAGGGCGAAACGTCGCCGTTCGGAGCACGGAGAGCGTGAATGGGTCGAAGAAGAGTGTGATGGTGGGGCCCGTTACGGGTATCAACGGTGGTAAAGTCACCCAATCCGTGTCCTGCCACCAGAGTCTGTTCCCTTACCTTCTCTATTACTGCCACGCGGTTCCTAAGGTTCGGCTCTACCAAGCGGATCTTCTCGACCCGAAATCCAAGGCCAAGATCAACCGGGGCATTGCCATCTGTCACTTGGACACCTCCGATTGGAGCCCCACCCACGGAGCCTTTCTCTCCCTCGGCTCTGCTCCGGGTCGGATCGAAGTTTGCCACTGGATCTTCCAGAACGACATGGCCTGGACCATTGCCGATTGA 1881 0.563 MNEQLTLLCLFILFSSLSVSFAAVGDGEKNPFTPKAYAVRYWDKEIRSTLPKPPFLFSKASPLSAAESAAFVKLAGQNALDKRLPEFCAAAKLLCFPEVVTSLEKHDKDANFAVYRDKNFTNYGTGRPGGVDSFKNYSEGENIPVNDFRRYSRDSAGHKDNFLSYGTEGNVVQQSFHTYGAGATGGTGEFKRYSDETNVPNLDFTSYSDDANGRTQLFSSYSENGNAGEQTFSSYGKNGNGPTNAFTSYGTESNVVGSGFSNYAENSNAANDTFKGYGVDMNNPTNTFSNYAAGGNGAVERFSNYRDKANVGADTFTSYAKSANAGDIGFSNYGKSFNEGTDTFSSYAKSSNGETKVGFTSYGVNNTFKEYSKEGPTVSFAKYTNVSTTLSVSDSAASGRMVNKWVEPGKFFREKMMKEGTVMPMPDIRDKMPQRSFLPRSILSKLPFSVSKMDDLKRVFRASDNGSMERMMRESLEECERAPSRGETKRCVGSLEDMIDFATSVLGRNVAVRSTESVNGSKKSVMVGPVTGINGGKVTQSVSCHQSLFPYLLYYCHAVPKVRLYQADLLDPKSKAKINRGIAICHLDTSDWSPTHGAFLSLGSAPGRIEVCHWIFQNDMAWTIAD 626
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco4g01451 626 ProSiteProfiles BURP domain profile. 411 625 IPR004873 -
Phco4g01451 626 SMART BURP_2 409 625 IPR004873 -
Phco4g01451 626 PANTHER POLYGALACTURONASE 1 BETA-LIKE PROTEIN 2 14 626 - -
Phco4g01451 626 Pfam BURP domain 411 623 IPR004873 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco4g01451 Phco-Chr4 12787068 12789055 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco4g01451 4 12787068 12789055 Phco4g01451 4 12787068 12789055 ECH
Phco4g01451 4 12787068 12789055 Phco8g02873 8 42297114 42299113 PCT