Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Phco4g01444 ATGAAAGAGAATATGGATATTGATCATCTTTACAAGAAAAAGATGTACAAACGTTCTAATGAAGAACAGGATGTGAGTAATAGGAAGGTTAGAAACTGTGATGCGGCAGAAAGTAGTTTTCAAAGCAAGATTTCTGATGAGGTGGATCCATCTGGGGCTTCATCATTCCAATTAGGAAATTTGAGTTGCTGCTCATTGGTTTGTAAATCAAGTGCTATTATGACAGCCAACAGATACTTCATGCTTCATAAAGTAACTCAGTCATGGCCTTCCCCTGCCTTGTGTTTTGTGGAGAGAGTGCCTCAAGATGCACAAAGTTCTCATGTTACAGTTTTTAATTCAGGTGATGGATCCTCAAAATCAGATAATGAGTCAACCTCCTCTATGCGGGAAGTTCATATTTCAATGCGGTTGATGGAGGACTTTCTAGATCTTTCTAAACAAAATACAGAAAAGGATTTGGAAACTTGTGGTATACTTGGTGCCTATCTTGAAAAGGGAACCCTCTATATGACTACTCTGATTATACCAAAGCAGGAATCCGCTTCCAATTCTTGTCAAGCTACAAATGAGGAGGAAGTTTTCAAAATTCTAAATGAAAGATCCCTTTGTCCTGTAGGATGGATCCATACACATCCTTCTCAAAGTTGTTTCATGTCATCTGTGGATCTGCACACTCAATATTCCTACCAGATGATGATTCCTGAGGCATTTGCCATCGTCTTGGCACCAAATGATAACATAAGGAGCTGTGGAGTATTTCGTCTAGTGGACCCTGAAGGAATGAATATTCTGAAAAATTGCCAGGAGACAGGATTTCATCCACACAAAGAACCAGATAATGGCAACCCTGTGTATGAGCACTGCTCCAATGTCTACAGAAACTCTAATCTAAGATTTGAAATCTTTGATTTACGCTAA 921 0.3909 MKENMDIDHLYKKKMYKRSNEEQDVSNRKVRNCDAAESSFQSKISDEVDPSGASSFQLGNLSCCSLVCKSSAIMTANRYFMLHKVTQSWPSPALCFVERVPQDAQSSHVTVFNSGDGSSKSDNESTSSMREVHISMRLMEDFLDLSKQNTEKDLETCGILGAYLEKGTLYMTTLIIPKQESASNSCQATNEEEVFKILNERSLCPVGWIHTHPSQSCFMSSVDLHTQYSYQMMIPEAFAIVLAPNDNIRSCGVFRLVDPEGMNILKNCQETGFHPHKEPDNGNPVYEHCSNVYRNSNLRFEIFDLR 306
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Phco4g01444 306 SUPERFAMILY JAB1/MPN domain 131 261 - -
Phco4g01444 306 PANTHER AMSH-LIKE PROTEASE 27 306 - -
Phco4g01444 306 Gene3D Cytidine Deaminase, domain 2 113 306 - -
Phco4g01444 306 FunFam AMSH-like ubiquitin thioesterase 2 114 306 - -
Phco4g01444 306 SMART pad1_6 131 259 IPR000555 GO:0005515|GO:0008233|GO:0008237
Phco4g01444 306 CDD MPN_AMSH_like 130 306 IPR044098 GO:0016579|GO:0061578|GO:0070536|GO:0140492
Phco4g01444 306 ProSiteProfiles MPN domain profile. 132 262 IPR037518 -
Phco4g01444 306 Pfam JAB1/Mov34/MPN/PAD-1 ubiquitin protease 128 236 IPR000555 GO:0005515|GO:0008233|GO:0008237
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Phco4g01444 Phco-Chr4 12694568 12698775 Dispersed
       

Event-related genes


Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco4g01444 4 12694568 12698775 Phco4g01444 4 12694568 12698775 ECH