Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco4g01434 ATGTTTGGAGGCAACAATGGAAATCGCTTGCTTCCTGTTTTCTTGGATGAGACTCAATTTCGGCATCAAACAAATGCGTCAAATCAGTTGCAGTTGTTTGGAAATTTACAAGCTGGATGTAGTGTTGACCCAGTTAATTACTTTGGAAATGAGCATGTCAGCTCCATGATTCAGCCTAATAAACGCAGCAAGGAAATGGAAGATATATCAAAACAAAGACTTCAGATTTCCTTAAATTACAATGTCAATCAAAAGGATGCTGATCGATTAGCAAGCATTCAAAATCCCAACCCTGTGTCCACAGGATTGAGGCTTTCATATGACGATGATGAGCATAACTCATCTGTTACTTCTGCGAGCGGCAGCATGACTGCCACACCGTCTATCATATTGTCTCTTGGTGATAATATCAGAACTGAGCTTGATAGGCAGCAAGAAGAGTTGGATCAGTATATTAAACTTCAGAAGGAACAGTTGTCAAAAGGGGTGAGAGACATGAAGCAAAAACACATGACTGCTCTCCTCTCCTCCATTGAGAAAGGTATTAGCGCAAAGCTAAAGGAAAAAGATGTGGAGATAGAAAACATGAATCGGAAAAACAGGGAGCTGGCAGAAAGAATAAAGCAGGTGGCTATTGAAGCACAAAGCTGGCATTACAGAGCAAAGTATAATGAGTCAGTTGTGAATGCATTAAGGAACAACCTGCAGCAGGCAATTTCACAAGGTGCTGAACAAGGGAAGGAAGGGTTTGGAGATAGTGAAGTTGATGATGATGCCTCGTATATAGATCCTAATAACTTCCTAAATATACCGGGTGCGCCTATAAACTCTACTCACAAGAGCTACCAAAATGCAGAGAATCTGACTTGCAGAGCTTGCAAGGCAAAGGCAGTTTCCATGTTGTTGATGCCTTGTAGGCACCTGTGCTTGTGTAAGGATTGTGAGGGATTTATCAATGTTTGTCCCGTTTGCCAATTGATAAAAACTGCAAGTGTTGAGGTGTATCTGTCTTAA 1014 0.4122 MFGGNNGNRLLPVFLDETQFRHQTNASNQLQLFGNLQAGCSVDPVNYFGNEHVSSMIQPNKRSKEMEDISKQRLQISLNYNVNQKDADRLASIQNPNPVSTGLRLSYDDDEHNSSVTSASGSMTATPSIILSLGDNIRTELDRQQEELDQYIKLQKEQLSKGVRDMKQKHMTALLSSIEKGISAKLKEKDVEIENMNRKNRELAERIKQVAIEAQSWHYRAKYNESVVNALRNNLQQAISQGAEQGKEGFGDSEVDDDASYIDPNNFLNIPGAPINSTHKSYQNAENLTCRACKAKAVSMLLMPCRHLCLCKDCEGFINVCPVCQLIKTASVEVYLS 337
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco4g01434 337 CDD mRING-HC-C3HC5_CGRF1-like 289 324 - -
Phco4g01434 337 Coils Coil 134 161 - -
Phco4g01434 337 Gene3D Death Domain, Fas 158 298 IPR011029 -
Phco4g01434 337 Gene3D - 77 333 - -
Phco4g01434 337 Coils Coil 186 213 - -
Phco4g01434 337 PANTHER SBP (S-RIBONUCLEASE BINDING PROTEIN) FAMILY PROTEIN 53 334 IPR017066 -
Phco4g01434 337 Pfam Zinc finger, C3HC4 type (RING finger) 287 325 - -
Phco4g01434 337 PIRSF SBP1_RNase_bind 1 337 IPR017066 -
Phco4g01434 337 Gene3D - 89 157 - -
Phco4g01434 337 ProSiteProfiles Zinc finger RING-type profile. 290 325 IPR001841 -
Phco4g01434 337 FunFam probable BOI-related E3 ubiquitin-protein ligase 2 271 336 - -
Phco4g01434 337 FunFam Baculoviral IAP repeat containing 7 299 335 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco4g01434 Phco-Chr4 12583726 12585802 Dispersed/Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco4g01434 4 12583726 12585802 Phco4g01434 4 12583726 12585802 ECH