Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco4g01420 ATGTGTAGCTTCCCTTTCAGCAGAGTTGCTCAACGACTTCGCATTATTCTGGATGGCTTGAGATTTAGTTTTGGTGGTGAAATTATGATATCTCTGGCTGTTAGATTATCTAATCACCCACCCACCACGCCCTTTTCCTCATCTAACGGTAATTCCCAGCATTTCTTCTCCCTCATCCCTTCTTTTTGTTCCCCTACAATAGTAAGAAAAATGGCGCGCAAGAAGATCAGAGAGTACGACTCCAAGAGGTTGTTGAAAGAGCACTTTAAGAGACTCTCTGGCAAGGAGTTGCCGATCAAGTCTGCACAAATTGATGGATCAACTGATTTCACTGAGCTACAAGAGAAGGAACCTTGGCTTTCATCTTCTAAATTGGTTGTGAAACCTGACATGCTATTTGGAAAGCGTGGCAAAAGCGGTTTGGTTGCTTTGAATTTGGATTTTGCTCAGGTTGTCTCATTTGTGAAAGAGCGTCTTGGAAAAGAGGTTGAGATGAGTGGATGCAAAGGACCCATAACAACTTTCATTGTTGAACCTTTCATCCCACACGATGAAGAGTTTTACCTTAACATAGTCTCTGAGAGACTCGGCAACAGTATAAGCTTTTCTGAATGTGGAGGAATTGAAATTGAAGATAACTGGGATAAGGTTAAGACTATATTCATTCCAACTGGAGTGTCTATTACATCAGAAATTGTTGCCCCACTTGTTGCAACCCTTCCCTTGGAGATCAAGGGAGAAATTGAGGAATTTCTTAAAGTGGTTTTCATGCTGTTTCAAGATCTGGATTTCACTTTCTTAGAGTTGAATCCTTTCACATTGGTTGATGGAAAGCCTTATCCTTTGGATATGAGAGGCGAGCTAGATGACACTGCTGCTTTCAAGAACTTCAAGAAATGGGGAGACATTGAATTTCCACTGCCATTTGGAAGGGTTATGAGTGCCACCGAGTCTTTCATTCATGGATTAGATGAGAAGACAAGTGCATCTTTAAAATTCACTGTGTTGAACCCAAAGGGACGAATTTGGACAATGGTAGCTGGGGGAGGTGCCAGTGTCATCTATGCTGATACGGTTGGAGATCTTGGCTTTGCATCTGAGCTTGGAAACTATGCTGAATACAGTGGTGCACCCAAAGAAGACGAAGTCTTACAGTATGCCAGAGTTGTAATTGATTGTGCAACTGCAAACCCTGATGGCCAAAAGAGAGCTCTTGTGATAGGAGGAGGCATAGCCAACTTTACTGATGTTGCTGCTACATTTAGTGGTATAATTCGGGCACTGAAGGAGAAGGAGTCAAAATTGAAAGCAGCAAGGATGAACATTTATGTGAGGAGAGGAGGGCCCAACTACCAGAAGGGTCTAGCTTTAATGCGAGCACTTGGAGAGGAGATTGGCATCCCCATTGAGATTTATGGACCTGAAGCCACAATGACTGGTATATGCAAAGAGGCAATACAATTCATTACTGCTTCTGCTTAA 1482 0.4258 MCSFPFSRVAQRLRIILDGLRFSFGGEIMISLAVRLSNHPPTTPFSSSNGNSQHFFSLIPSFCSPTIVRKMARKKIREYDSKRLLKEHFKRLSGKELPIKSAQIDGSTDFTELQEKEPWLSSSKLVVKPDMLFGKRGKSGLVALNLDFAQVVSFVKERLGKEVEMSGCKGPITTFIVEPFIPHDEEFYLNIVSERLGNSISFSECGGIEIEDNWDKVKTIFIPTGVSITSEIVAPLVATLPLEIKGEIEEFLKVVFMLFQDLDFTFLELNPFTLVDGKPYPLDMRGELDDTAAFKNFKKWGDIEFPLPFGRVMSATESFIHGLDEKTSASLKFTVLNPKGRIWTMVAGGGASVIYADTVGDLGFASELGNYAEYSGAPKEDEVLQYARVVIDCATANPDGQKRALVIGGGIANFTDVAATFSGIIRALKEKESKLKAARMNIYVRRGGPNYQKGLALMRALGEEIGIPIEIYGPEATMTGICKEAIQFITASA 493
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco4g01420 493 Gene3D - 310 492 IPR016102 -
Phco4g01420 493 PANTHER SUCCINYL-COA SYNTHETASE BETA CHAIN 74 462 IPR005809 GO:0006099
Phco4g01420 493 FunFam ATP-citrate synthase alpha chain protein 310 492 - -
Phco4g01420 493 SUPERFAMILY Succinyl-CoA synthetase domains 327 473 IPR016102 -
Phco4g01420 493 FunFam ATP-citrate synthase alpha chain protein 71 303 - -
Phco4g01420 493 SUPERFAMILY Glutathione synthetase ATP-binding domain-like 74 306 - -
Phco4g01420 493 Gene3D - 71 303 - -
Phco4g01420 493 Pfam ATP-grasp domain 76 273 IPR013650 -
Phco4g01420 493 Pfam ATP citrate lyase citrate-binding 311 487 IPR032263 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco4g01420 Phco-Chr4 12464362 12472372 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco4g01420 4 12464362 12472372 Phco4g01420 4 12464362 12472372 ECH