Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco4g01414 ATGGCCACGTTTGTTCCTTCTTCTTCCATTTTCCGACCAACGCTGATTCGGTGCACCAACGACCGTCGGGCGCTGTTTAACCGCATTGCTCCTGTTTATGATAACCTGAATGACTTGCTGAGCGTTGGGCAACACCGGGTTTGGAAGCGAATGGCGGTGTCGTGGACTGGAGCGAAATTGGGAGACCGTGTGTTGGATGTGTGCTGTGGAAGTGGGGATTTGTCATTTCTCTTGTCCCACAAAGTAGGCTGTGATGGCAAGGTGATTGGCCTTGATTTCTCGAAGGATCAGTTATCGATTGCTTCATCCCGGCAGCAATTGCTTTCAAAGAAATGCTTCACGAATATTGAGTGGGTTGAAGGTGATGCTCTTAACTTGCCATTTATGGATGGTTGGTTTGATGCTATCACTATGGGCTATGGTCTTCGAAATGTGGTTGATAAACATAAGGCTATGCAGGAAATTTTCCGTGTCCTAAAAGCTGGCTCTACAGTGTCTATACTAGACTTTAATAAAAGCAATGAGTCACTAACTTCTGCAATTACGGAATGGATGATTGACAATGTTGTTGTTCCTGTTGCCTCTGCTTATGGTCTTTCAGAGGAATACAGATACCTTAAAAGTTCAATAAGAGAATTTTTAACAGGGAAGGAACTGGAGGAACTTGCCTTGGAAGTAGGATTTTCTGCTGCCAGACATTACGAGATTGGTGGAGGCCTCATGGGGTGTTTGGTAGCTAAGCGTTAG 747 0.4511 MATFVPSSSIFRPTLIRCTNDRRALFNRIAPVYDNLNDLLSVGQHRVWKRMAVSWTGAKLGDRVLDVCCGSGDLSFLLSHKVGCDGKVIGLDFSKDQLSIASSRQQLLSKKCFTNIEWVEGDALNLPFMDGWFDAITMGYGLRNVVDKHKAMQEIFRVLKAGSTVSILDFNKSNESLTSAITEWMIDNVVVPVASAYGLSEEYRYLKSSIREFLTGKELEELALEVGFSAARHYEIGGGLMGCLVAKR 248
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco4g01414 248 PANTHER METHYLTRANSFERASE 32 230 - -
Phco4g01414 248 Gene3D Vaccinia Virus protein VP39 28 248 IPR029063 -
Phco4g01414 248 ProSiteProfiles UbiE family SAM-binding methyltransferase profile. 11 248 IPR004033 GO:0008168
Phco4g01414 248 ProSitePatterns ubiE/COQ5 methyltransferase family signature 1. 33 48 IPR023576 GO:0008168
Phco4g01414 248 NCBIfam ubiquinone/menaquinone biosynthesis methyltransferase 24 247 IPR004033 GO:0008168
Phco4g01414 248 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 14 240 IPR029063 -
Phco4g01414 248 Hamap Ubiquinone/menaquinone biosynthesis C-methyltransferase UbiE [ubiE]. 13 248 IPR004033 GO:0008168
Phco4g01414 248 Hamap 2-phytyl-1,4-naphtoquinone methyltransferase [menG]. 21 248 IPR032904 GO:0042372|GO:0052624
Phco4g01414 248 Pfam ubiE/COQ5 methyltransferase family 24 242 - -
Phco4g01414 248 CDD AdoMet_MTases 63 162 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco4g01414 Phco-Chr4 12310842 12314783 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco4g01414 4 12310842 12314783 Phco4g01414 4 12310842 12314783 ECH