Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco4g01409 ATGTGTTGGATAGATTTGGTGGGAGACGTGTTTCCCTTGGCAGAATCAAAGCCTAGGAACACACACTTTTGTTTTGGTCATGCAAGAACAAGAAGACAAGGCCAATGTGAACAAACTCACACGGATTTGTCAATAGAAACAAGGAAGAGAGATCTCTCAAGCATGAATTTTAGCTTGTGTTTGAGCTCCTCAATCATTTCCACACTTGTACATTTCCTTCTTGTTGCTTCTTTGCTTTGTCCTGTTTGTTCCTCAGAAATGGGCAACACACGAGTTGCCAACCAGACTCTTAAGCCGCAAGAAGAGGTCCACAAGATGAACATCATAAGAACTCGTCTTCAGCAAATCAACAAGCCCTCTGTTAAGACAATTCAGAGTCCTGACGGGGATGTAATAGACTGTGTGGTGTCTCATCAGCAACCAGCTTTTGATCATCCTATCTTGAAGGGACACAAACCACTGGATCCTCCAGAAAGGCCTAAAGGTCATAACAAGAGGGACATATTGAGTGAGAATTTTCAGCTATGGACCATGTTAGGGGAGTCATGTCCAGAAGGTACAATTCCAATCAGAAGAACAACAGAACAAGACATGTTAAGGGCTAGTTCTGTGAGCAGATTTGGAAGGAAAATAAGAAGGCGCGTTAGAAGGGACACCAACAGCAATGGTCATGAGCATGCAGTTGGGTATGTGAGTGGAGAACAGTACTACGGAGCAAAGGCTAGCATAAACGTGTGGGCACCCCGTGTGGCAAATCAAGATGAATTCAGCCTGTCCCAAATGTGGGTCATATCTGGTTCATTTGGGGATGATCTCAACACTATTGAAGCTGGTTGGCAGGTCAGCCCTGAGCTCTATGGGGACACCTACCCCAGATTCTTCACTTATTGGACGAGTGATGCATATCAAGCAACTGGATGCTACAATTTACTGTGCTCAGGTTTTGTTCAAACTAACAATAGAATTGCTATTGGAGCTGCGATCTCTCCAACTTCTTCCTATGCTGGTGGACAATTTGATATTAGCTTGCTGATCTGGAAGGATCCAAAGCATGGGAATTGGTGGCTTGAGTTTGGATCCGGAATCTTAGTCGGGTATTGGCCATCATTCTTGTTCACACACCTAAGGGATCATGCAAGCATGGTGCAATTTGGTGGAGAAGTGGTGAATTCAAGGCAATCAGGGTCTCACACTTCAACCCAAATGGGTAGTGGACATTTTGCAAGTGAAGGGTTTGGAAAAGCTTCATATTTTCGGAATATGCAAGTTGTGGATTGGGACAACAACTTGGTACCCTTGTCAAATCTTAGGGTTCTTGCCGATCACCCCAATTGCTATGACATTCAAGGAGGGATTAATAATGTTTGGGGTAATTACTTTTACTATGGTGGACCTGGGAGAAATGTGAGATGTCCCTAA 1419 0.4405 MCWIDLVGDVFPLAESKPRNTHFCFGHARTRRQGQCEQTHTDLSIETRKRDLSSMNFSLCLSSSIISTLVHFLLVASLLCPVCSSEMGNTRVANQTLKPQEEVHKMNIIRTRLQQINKPSVKTIQSPDGDVIDCVVSHQQPAFDHPILKGHKPLDPPERPKGHNKRDILSENFQLWTMLGESCPEGTIPIRRTTEQDMLRASSVSRFGRKIRRRVRRDTNSNGHEHAVGYVSGEQYYGAKASINVWAPRVANQDEFSLSQMWVISGSFGDDLNTIEAGWQVSPELYGDTYPRFFTYWTSDAYQATGCYNLLCSGFVQTNNRIAIGAAISPTSSYAGGQFDISLLIWKDPKHGNWWLEFGSGILVGYWPSFLFTHLRDHASMVQFGGEVVNSRQSGSHTSTQMGSGHFASEGFGKASYFRNMQVVDWDNNLVPLSNLRVLADHPNCYDIQGGINNVWGNYFYYGGPGRNVRCP 472
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco4g01409 472 Pfam Neprosin activation peptide 123 230 IPR025521 -
Phco4g01409 472 FunFam Putative carboxyl-terminal proteinase 245 364 - -
Phco4g01409 472 MobiDBLite consensus disorder prediction 148 164 - -
Phco4g01409 472 MobiDBLite consensus disorder prediction 145 164 - -
Phco4g01409 472 Pfam Neprosin 253 465 IPR004314 -
Phco4g01409 472 Gene3D - 245 361 - -
Phco4g01409 472 PANTHER PROTEIN, PUTATIVE (DUF239)-RELATED-RELATED 109 468 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco4g01409 Phco-Chr4 12241562 12245272 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco4g01409 4 12241562 12245272 Phco4g01409 4 12241562 12245272 ECH
Phco4g01409 4 12241562 12245272 Phco8g02725 8 40179345 40183083 PCT