Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco4g01315 ATGCAGATCAGCTCCACCGTACCAGCCCACAACCTTCACAAGTTCCAGGCAATAAGGTGCCCCAGCTTCAGCTTCAGATGCCAAGCCTCCTCATCCTCAACCTTTCAGAAGCCCTTTGTCACCACCGAGTCAACTCGCTTGCACCTCGCCAACCTCGACAAGCTCCTCGAGACCCAGATGCCCGTCGCACCATCCACCCAACTCCACCACCAACAACAACACCCACACCAACCAATCATCAACCACCCGAAGGAAAAGAAAGGAAGAAGCTTTCTAGAAGGGCTCAACTTGGCCAGGCTCTGGCCGGAGATGAAGGCAAACGAAGAAATGTCCCCGCGCCACCTCAATCGCCTCCAGCGGCTGCTATCCATGACTGCGGAGTACTCCCCGAGGAACATCCTCGGCGGGCGGTGGAGAGAGTACCACGGCAGCAACGACTGGAAAGGGATGCTGGATCCTCTGGACGAGAATCTCCGGCGAGAAGTCGTCCGCTACGGCGAATTCGTCCAAGCCGCGTATCAGGCCTTTCACTCGGACCCAGCCATGTCAACCGAGGAGCCGCCACATCCTCGCCACGTGGCGCTTCAGGATAGATCATACAGAGTGACGAAAAGCCTCTATGCCACGTCATCGATCGGGTTGCCAAAATGGGTGGATGACGTGGCCCCGGATCTTGGATGGATGAGCCAGCGGTCGAGCTGGGTCGGATATGTGGCCGTTTGCGAAGACAGAAGAGAGATCGCACGAATGGGAAGGAGAGACATCGTTATCTCTCTCCGCGGAACCTCGACGTGTATGGAATGGGCCGAGAATCTCAGGGCCCATTTGGTAGACCTTCCCGGAGGGCAAGGAAAGCCCAAAGTGGAGTGTGGGTTCATGAGTCTGTACAAGACCAAAGGAGCCCACGTGGCGAGTCTGTCTGAGTCCGTTGTGGAGGAAGTGAAGAGACTCGTGAATCTTTACAGAGGCGAAGAGTTGAGCATTACCGTCACAGGACACAGCCTGGGTGCCACGCTGGCCTTATTGGTGGCCGATGAAATAAGCACGTGCTGCGCCGGAGTTCCACCCGTGGCTGTTTTTTCCTTCGGTGGGCCGCGCGTGGGCAACAAGGCCTTCGGGGAGCGGTTGACGGCGAAGAACGTGAAAGTTCTACGAATTGTGAACTCGCAGGACGTGATAACACGCGTGCCTGGGATCTTCGTGAGCGAGGAGCTTGAACAGAAAATACGGAACGTGGGAGGGGGTGTGTTGGAGGAGAAGACGCCGTTGGCATACTCGCACGTGGGAACTGAGCTGCGCGTGCACACGAAGATGTCGCCGTACCTTAAGCCGGATGCGGACATGGCGTGTTGTCACGATTTGGAGGCTTACTTGCATTTGGTGGATGGGTTCCTGGCTTCAAACTGTCCCTTCAGAGCCAATGCCAAGAGAAGCTTGGCTAGGTTAATGCAAGACCAAAGCTCCAATGTAAAAAAATTGTACACTAGCAGGGCTAAAGCCTTAACTGTCAATCTCTCTAGACAGGGATCCATCTCCATGTCTAATTGTTTACCAAGTCCTTCTTAA 1566 0.5524 MQISSTVPAHNLHKFQAIRCPSFSFRCQASSSSTFQKPFVTTESTRLHLANLDKLLETQMPVAPSTQLHHQQQHPHQPIINHPKEKKGRSFLEGLNLARLWPEMKANEEMSPRHLNRLQRLLSMTAEYSPRNILGGRWREYHGSNDWKGMLDPLDENLRREVVRYGEFVQAAYQAFHSDPAMSTEEPPHPRHVALQDRSYRVTKSLYATSSIGLPKWVDDVAPDLGWMSQRSSWVGYVAVCEDRREIARMGRRDIVISLRGTSTCMEWAENLRAHLVDLPGGQGKPKVECGFMSLYKTKGAHVASLSESVVEEVKRLVNLYRGEELSITVTGHSLGATLALLVADEISTCCAGVPPVAVFSFGGPRVGNKAFGERLTAKNVKVLRIVNSQDVITRVPGIFVSEELEQKIRNVGGGVLEEKTPLAYSHVGTELRVHTKMSPYLKPDADMACCHDLEAYLHLVDGFLASNCPFRANAKRSLARLMQDQSSNVKKLYTSRAKALTVNLSRQGSISMSNCLPSPS 521
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco4g01315 521 Pfam Lipase (class 3) 256 399 IPR002921 GO:0006629
Phco4g01315 521 CDD Lipase_3 158 462 - -
Phco4g01315 521 PANTHER PHOSPHOLIPASE A1-IBETA2, CHLOROPLASTIC 44 498 - -
Phco4g01315 521 Gene3D alpha/beta hydrolase 137 510 IPR029058 -
Phco4g01315 521 SUPERFAMILY alpha/beta-Hydrolases 159 464 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco4g01315 Phco-Chr4 11253221 11254786 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco4g01315 4 11253221 11254786 Phco6g02721 6 48710170 48714615 PCT