Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco4g01280 ATGAACGACGAACAACAATATCTGCTTCTCAACGCTTCTTCTCGCTTCTCGCCCCCTCAAGGAGTCAAGCTATCGTATGGCACCGCCGGCTTCAGGGCCGATGCGTCGCTTCTCCCATCGACGGTCTACAGAGTGGGAATCCTCGCAGCCCTTAGATCGCTCAAAACCGGTTCCGTCATCGGTCTCATGATCACTGCTTCACACAACAAAGTTTCTGATAATGGAGTCAAAATCGCTGACCCTAACGGTGGCATGCTCTCCCAGCATTGGGAACCCTTCGCCGACGCCCTCGTCAATGCCCCTTCTCCCCAACACCTCCTCCTGTTGATAAATGAATTCGTGGCGAAGGAGGGGATCTTGATGGATGGGGTCTGCCAGGCTGAAGTGCTTTTGGGGAGAGACACTCGGCCAAGTGGAGATGCTTTGGTTGACGCAGCTAGGCAGGGGGTTACTTCAATTGTTGGAGCTGTTGCAACGGACATGGGGATCTTGACAACTCCACAATTGCACTGGATGGTTCGGGCTCGTAACAAGGGCATACAAGCTTCAGAGCAGGATTACTTTGAACAGCTTTCAAGCTCATTCAGGTGCTTGGAGGATTTGATCCCAGCTGAAAAAAGTAAGTTTGGTAGGATGAACGATAAAGTGGTTGTGGATGGATCTAATGGAGTTGGTGGACTGAAACTTAAAGATTTAGGGAGATTGTTGAATTCTTTGGTAATTGAGGTTCGGAACAGCGGTGAAGATGGAGGTGTACTGAATGATGAAGTGGGTGCTGATTATGTGCAGAAAGAGAAGGTTGTTCCTCACTGCTTTGGTTCTAAAGATGCTGGGATAAGGTGCGCTAGTTTGGATGGAGATGCTGATCGGTTTGTTTATTTTATTGTACCATCTGAAAGCAATGGCAGGATTGATCTTGTTGATGGTGACAAGATACTATCCCTGTTTGCCTTATTTATTAGGGAGCAAATGAGCTTTCTTAATGAGAATGAAGGCATAAAAGATTGCCACCAAGCTCGTCTTGGTGTTGTACAGACTGCCTATGCAAATGGGGCATCTACTAATTATCTTAGACAGTTGGGGCTTGAAGTTAATTTTACTCCAACTGGAGTTAAATACCTGCATGAAAAAGCTGCTGAATTTGATATTGGTATCTACTTTGAGGCAAATGGCCATGGAACTGTCTTATTTTCAGAATCTTTCATCAGGTGGTTGGAGGCCAGAACTAAGGAGATTTCTTCAGGATCCAAAGTTTCAGAAGGGGGAAAAGCTGCTTTGAGGTTATTGGCAGTCAGTAAGTTGATCAACCAAGCTGTTGGAGATGCTTTGAGTGGATTGCTCTTGGTCGAAGTCATATTACAGTACATGGGATGGTCAATACACAGATGGAATGAACTTTATCATGATTTACCGAGCAGGCAGCTCAAGGTTAAAGTTGCAGACAGAAATGCTGTGCATACAGCAAATGCAGAAACTGTGGCTGTTAGCCCCCCTGGTTTACAAGAGGCCATCAATGCAGAAACTGGCAAGTACCACCAAGGTCGATGCTTTGTGCGACCATCTGGTACTGAGGATGTTGTTCGTGTCTATGCTGAGGCATCCACGCAGGAAGCAGCTGATACACTAGCCAACTCTGTGGCTAAGCTTGTGGACCAATTCTTAGGGCTCAGCAGCTCCTGA 1680 0.4661 MNDEQQYLLLNASSRFSPPQGVKLSYGTAGFRADASLLPSTVYRVGILAALRSLKTGSVIGLMITASHNKVSDNGVKIADPNGGMLSQHWEPFADALVNAPSPQHLLLLINEFVAKEGILMDGVCQAEVLLGRDTRPSGDALVDAARQGVTSIVGAVATDMGILTTPQLHWMVRARNKGIQASEQDYFEQLSSSFRCLEDLIPAEKSKFGRMNDKVVVDGSNGVGGLKLKDLGRLLNSLVIEVRNSGEDGGVLNDEVGADYVQKEKVVPHCFGSKDAGIRCASLDGDADRFVYFIVPSESNGRIDLVDGDKILSLFALFIREQMSFLNENEGIKDCHQARLGVVQTAYANGASTNYLRQLGLEVNFTPTGVKYLHEKAAEFDIGIYFEANGHGTVLFSESFIRWLEARTKEISSGSKVSEGGKAALRLLAVSKLINQAVGDALSGLLLVEVILQYMGWSIHRWNELYHDLPSRQLKVKVADRNAVHTANAETVAVSPPGLQEAINAETGKYHQGRCFVRPSGTEDVVRVYAEASTQEAADTLANSVAKLVDQFLGLSSS 559
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco4g01280 559 SUPERFAMILY Phosphoglucomutase, first 3 domains 126 178 IPR016055 GO:0005975|GO:0016868
Phco4g01280 559 FunFam Phosphoacetylglucosamine mutase 308 400 - -
Phco4g01280 559 Gene3D - 307 393 - -
Phco4g01280 559 PANTHER PHOSPHOACETYLGLUCOSAMINE MUTASE 11 556 - -
Phco4g01280 559 SUPERFAMILY Phosphoglucomutase, first 3 domains 286 393 IPR016055 GO:0005975|GO:0016868
Phco4g01280 559 FunFam Phosphoacetylglucosamine mutase 215 304 - -
Phco4g01280 559 FunFam Phosphoacetylglucosamine mutase 4 182 - -
Phco4g01280 559 Pfam Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III 308 396 IPR005846 GO:0005975|GO:0016868
Phco4g01280 559 Gene3D - 215 304 - -
Phco4g01280 559 SUPERFAMILY Phosphoglucomutase, first 3 domains 185 294 IPR016055 GO:0005975|GO:0016868
Phco4g01280 559 FunFam Phosphoacetylglucosamine mutase 471 556 - -
Phco4g01280 559 PIRSF PAGM 2 556 IPR016657 GO:0004610
Phco4g01280 559 Pfam Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I 127 177 IPR005844 GO:0005975|GO:0016868
Phco4g01280 559 Pfam Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I 57 89 IPR005844 GO:0005975|GO:0016868
Phco4g01280 559 Gene3D - 2 181 - -
Phco4g01280 559 Pfam Phosphoglucomutase/phosphomannomutase, C-terminal domain 476 550 IPR005843 GO:0016868|GO:0071704
Phco4g01280 559 CDD PGM3 25 550 IPR016657 GO:0004610
Phco4g01280 559 Gene3D - 471 556 - -
Phco4g01280 559 SUPERFAMILY Phosphoglucomutase, C-terminal domain 458 555 IPR036900 GO:0016868|GO:0071704
Phco4g01280 559 SUPERFAMILY Phosphoglucomutase, first 3 domains 53 100 IPR016055 GO:0005975|GO:0016868
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco4g01280 4 10828962 10833049 Phco4g01280 4 10828962 10833049 ECH