Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco4g01273 ATGACCTGTTTGTTCTTCAGAATCTCTTCCTTCCCTAACCACGTTTCCCCTTGGGTGGTGCTTCCTTCCATCACTTACAACGTAGTTGATGTTGTTCTAGCAGCTAGGCTTCCTTTTCGAATTTCAAGGACATTGCTGTTTTCTTCATCCTATTATATCATTTTAACTGGACAGCTCTGCAGAGGGACCGGCATACTTGTAGATGAGATCAGCATGAGTTCTCTCACCGGACTTGCTCCACTTGAAGCTGTGCTCTTTGATGTAGATGGAACACTCTGTGATTCTGATCCACTCCACTATGATGCTTTGCGTGAAATGCTCCTAAAGATCGGTTTTAATGGAGGTGTTCCTATAACGGAGGAATTTTTTATTGAAAAATTTTCTGGAAAGAACAGCGTTGATACTGCTTTAGTTGCCTTTCCTGGTGATCTGGAACAAGGTTTGAAGTTTGTAGAAGATAAGGAAGTCATGTTCCGGAGATTGGCAGAGGAGAAACTGAAGCCTGTGAAAGGCCTTGATAAATTGACGACATGGGTTGAAAACCATGGTCTGAAGAGAGCTGCAGTTACCAATTCTCCAAGAGTAAATGCAGAACTCATGATCTCAAAACTTGGTCTCTCTGACTTCTTTGATGTTCTTATTATTGGTGATGAATGTGAACGTGGTAAACCTTATCCCGACCCCTACTTGAAAGTTCTAGAAGTTCTGAAGGCATCGAAGGATCATGCATTTGTATTTGAGGATTCTTTTTCAGGGATTACAGCTGGAGTGGAAGCTGGGATGCCGGTTATTGGCATAGCTACACGAAACCCAGAGGATTTACTGATGAAAGCAAAGCCTGCCTTTCTGATTAAGGATTATGAGGATCCAAAATTGTGGGCAGCTTTAGAAGAACTTGACAAGCCTGGTGCTGATAAGTTGGAATTTCTGGATAAAAACATTTAG 945 0.4201 MTCLFFRISSFPNHVSPWVVLPSITYNVVDVVLAARLPFRISRTLLFSSSYYIILTGQLCRGTGILVDEISMSSLTGLAPLEAVLFDVDGTLCDSDPLHYDALREMLLKIGFNGGVPITEEFFIEKFSGKNSVDTALVAFPGDLEQGLKFVEDKEVMFRRLAEEKLKPVKGLDKLTTWVENHGLKRAAVTNSPRVNAELMISKLGLSDFFDVLIIGDECERGKPYPDPYLKVLEVLKASKDHAFVFEDSFSGITAGVEAGMPVIGIATRNPEDLLMKAKPAFLIKDYEDPKLWAALEELDKPGADKLEFLDKNI 314
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco4g01273 314 SFLD C1.5.6: HAD, Beta-PGM, Phosphatase Like 81 289 - -
Phco4g01273 314 CDD HAD_BPGM-like 83 268 - -
Phco4g01273 314 NCBIfam HAD-IA family hydrolase 153 266 IPR006439 -
Phco4g01273 314 Gene3D Putative phosphatase; domain 2 96 164 IPR023198 -
Phco4g01273 314 SFLD Haloacid Dehalogenase 81 289 - -
Phco4g01273 314 PRINTS Haloacid dehalogenase/epoxide hydrolase family signature 179 192 IPR006439 -
Phco4g01273 314 PRINTS Haloacid dehalogenase/epoxide hydrolase family signature 81 92 IPR006439 -
Phco4g01273 314 PRINTS Haloacid dehalogenase/epoxide hydrolase family signature 210 226 IPR006439 -
Phco4g01273 314 PANTHER 6-PHOSPHOGLUCONATE PHOSPHATASE 82 300 - -
Phco4g01273 314 SUPERFAMILY HAD-like 52 298 IPR036412 -
Phco4g01273 314 Pfam Haloacid dehalogenase-like hydrolase 84 266 IPR041492 -
Phco4g01273 314 Gene3D - 82 290 IPR023214 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco4g01273 Phco-Chr4 10789125 10791161 Dispersed/Tandem
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco4g01273 4 10789125 10791161 Phco4g01273 4 10789125 10791161 ECH