Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco4g01243 ATGGCGGAGAAGTTGTTAGCAACCTTAGGGGATCTGGAGAGGGACTCATTCGTGCCTCTTCTCTCCAAGCTGATTGGGGAATCGAAGCACGTGCAGAACAACCCGCCGGAGCTCATTCCCGAAGAGGACAGAGTGGTGAAGCACGTGTTGGACGTTCTATTACCCTTCAGCACTACCACCGGCGGCGGTCCCTTGCTCGTCAACCACGTCACCTACTCGCCCGGCCGGGGGAACCTCATCGTCGAGTACCCCGGCACCGTTCCCGGCAAAATCCTCTCCTTCGTCGGTTGCCACATGGACGTCGTCACAGCCAATCCCAACGATTGGGATTTTGATCCATTTTCTCTGAGCATTGATGGGGATAAACTTCGGGGTCGTGGAACTACTGATTGTTTGGGTCACGTGGCACTTGTCGCGGAACTCATGAAAAAGCTCGGGCAAACCAAGCCGAATTTGAAATCAACTGTTGTTGCTGTTTTTATAGCCAATGAAGAGAATTCTTCAATTACTGGTATTGGAGTGGATGCGCTTGTCAAAGATGGTCTCCTCAATAAGCTGAAGGATGGTCCTGTGTACTGGATTGACACGGCAGATAAACAACCATGCGTAGGGACTGGTGGTATGATACCTTGGAAACTTCAGGTCACGGGGAAGCTCTTTCATAGTGGATTAGCTCATAAAGCTATAAATGCATTGGAGTTAGGCATGGATGCTCTAAAGGAAATCCAGTTTCGATTTTACCGAGACTTCCCACCTCATCCTCAGGAAGAGGTTTATGGGTTTGCAACTCCTTCAACCATGAAACCAACCCAATGGAGTTATCCAGGAGGGGGAATCAACCAAATTCCAGGGGAATGTACTATTTCAGGAGATGTCAGGTTGACTCCATTCTACAATGTAAAGGATGTAATGAAGAAGCTGCAAGAATACGTGGACGATATTAATGAGAATATTAAGAAGCTAGAAAGTAGAGGTCCAGTTTCAAAATATGTCCTACCCGATGAAAACATAAGAGGAAGCCTTACTTTAACTTTTAACGAGGCGCTGTCTGGAGTTGCTTGTGATCTTAATTCTAGAGGTTTCCATGTTTTATGCAAAGCAACTGAAGAAGTAGTTGGCCACGTAAAGCCTTACTCGATTACTGGGAGTTTGCCTCTCATTCGGGAACTACAGGAAGAAGGTTTTGATGTTCAAACTTCTGGCTACGGCCTAATGGCTACTTACCATGCTCAGAACGAGTACTGCCTTTTCACGGATATGTCCCAAGGATATCGGGTCTTTTCGAGAATCATCTCTCAACTGGAAGATTGA 1311 0.4683 MAEKLLATLGDLERDSFVPLLSKLIGESKHVQNNPPELIPEEDRVVKHVLDVLLPFSTTTGGGPLLVNHVTYSPGRGNLIVEYPGTVPGKILSFVGCHMDVVTANPNDWDFDPFSLSIDGDKLRGRGTTDCLGHVALVAELMKKLGQTKPNLKSTVVAVFIANEENSSITGIGVDALVKDGLLNKLKDGPVYWIDTADKQPCVGTGGMIPWKLQVTGKLFHSGLAHKAINALELGMDALKEIQFRFYRDFPPHPQEEVYGFATPSTMKPTQWSYPGGGINQIPGECTISGDVRLTPFYNVKDVMKKLQEYVDDINENIKKLESRGPVSKYVLPDENIRGSLTLTFNEALSGVACDLNSRGFHVLCKATEEVVGHVKPYSITGSLPLIRELQEEGFDVQTSGYGLMATYHAQNEYCLFTDMSQGYRVFSRIISQLED 436
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco4g01243 436 SUPERFAMILY Zn-dependent exopeptidases 11 434 - -
Phco4g01243 436 Gene3D Zn peptidases 5 202 - -
Phco4g01243 436 FunFam Acetylornithine deacetylase, putative 11 202 - -
Phco4g01243 436 Gene3D - 207 323 - -
Phco4g01243 436 FunFam Peptidase M20/M25/M40 family protein 207 322 - -
Phco4g01243 436 PANTHER ACETYLORNITHINE DEACETYLASE 5 435 - -
Phco4g01243 436 Coils Coil 304 324 - -
Phco4g01243 436 Pfam Peptidase dimerisation domain 204 317 IPR011650 -
Phco4g01243 436 SUPERFAMILY Bacterial exopeptidase dimerisation domain 207 317 IPR036264 -
Phco4g01243 436 Pfam Peptidase family M20/M25/M40 95 432 IPR002933 GO:0016787
Phco4g01243 436 CDD M20_ArgE-related 12 434 - -
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco4g01243 4 10492296 10497006 Phco4g01243 4 10492296 10497006 ECH