Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco4g01174 ATGAAAACCAAAACGGTTAAGGGAAATTGGAGATGGAACTGGAGGACGAACAAGCTCGGCTTGCCTTTCGTCTTCCTTATAGGCATCTTCTTCTTTCTCGCTGGATTATTGGCTTCCAGTCTCTTTTCTCACTCTCAGGAACGTGAATACGACCTGAAGCTGATGCCGAGAGCGAGGTTAACTGAAAAATCGACGGAGGAGGAGACGGAATATCATTTGTCGCAAGCTGGAGAATCCGGAGACGATTCCATTACATTGATTCCTTTTCAGGTTTTGAGCTGGTACCCTCGCGCTCTATATTTTCCTAATTTTGCGAGTCCACAACAATGTGAAAGCATAGTTAAAATGGCAAGGGTAGGACTCAAGCCATCCACATTGGCGTTACGTAAGGGAGAAACGGAGGAAAATACAAAGGGAATCAGAACAAGCTATGGTGTTTTTCTGAGTGCTTCCGAGGATGAAACGGGGACTTTATATGCCGTTGAGGAGAAGATTGCCAAAGCAACAAAACTTCCTAGAACTCATGGAGAGGCATTTAATGTCCTACGCTATGAGGTTGGACAGAAATACAGTTCTCATTATGATGCATTTGATTATGCTGAATATGGCCCACAAAAGAGCCGACGGGTAGCTTCTTTTTTGCTATATTTAACTGATGTTACAGAAGGTGGGGAGACCATGTTTCCGTTTGAGAATGGTTTCAACATGGATGGTAGGTATGATTTCGAGGACTGTATTGGTTTAAAAGTAAGGCCACGCAGAGGGGATGGGCTTCTATTTTACTCATTATTACCTAATGGTACAATTGACCAGACATCACTCCACGGAAGCTGTCCCGTCATAAAAGGAGAGAAGTGGGTGGCAACAAAGTGGTTAAGGGATCAAATACAAGACGACGATTAA 903 0.4363 MKTKTVKGNWRWNWRTNKLGLPFVFLIGIFFFLAGLLASSLFSHSQEREYDLKLMPRARLTEKSTEEETEYHLSQAGESGDDSITLIPFQVLSWYPRALYFPNFASPQQCESIVKMARVGLKPSTLALRKGETEENTKGIRTSYGVFLSASEDETGTLYAVEEKIAKATKLPRTHGEAFNVLRYEVGQKYSSHYDAFDYAEYGPQKSRRVASFLLYLTDVTEGGETMFPFENGFNMDGRYDFEDCIGLKVRPRRGDGLLFYSLLPNGTIDQTSLHGSCPVIKGEKWVATKWLRDQIQDDD 300
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco4g01174 300 SMART p4hc 96 293 IPR006620 GO:0005506|GO:0016705|GO:0031418
Phco4g01174 300 FunFam Prolyl 4-hydroxylase 4 88 294 - -
Phco4g01174 300 Pfam 2OG-Fe(II) oxygenase superfamily 179 293 IPR044862 -
Phco4g01174 300 PANTHER PROLYL 4-HYDROXYLASE ALPHA SUBUNIT 66 291 IPR045054 -
Phco4g01174 300 Gene3D q2cbj1_9rhob like domain 89 293 - -
Phco4g01174 300 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 174 294 IPR005123 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco4g01174 Phco-Chr4 9717648 9724301 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco4g01174 4 9717648 9724301 Phco4g01174 4 9717648 9724301 ECH
Phco4g01174 4 9717648 9724301 Phco6g02776 6 49100120 49100476 PCT