Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco4g01095 ATGTGGGCCTCCACCCACCTACCAAACCACCACCAGAGAAGAAACAAGACAACAAGCATAGGGAATCGTGAAGAAGGGCACATTGTTGGTGGTGGTGTTGTCCTCGTCGTCTGCTTGGCTTGGGTTGGCTTTAGGGCTTTGAATGCCATTTGGGGTTCCGCTCTCAGGCAATCAAGCTCCAAAGCTGACCCCTTTCTCCCACTTCTCACTCACAAACCTTCTTCTTCTTCTTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCCGGAACAACAATGGTAGAAGACATCTGTTTGTTCTACAAGGAAGTTCTCGTTATGAAGCCTCCAAAGAGATCACCGATGTTGTTAAGGACAGCAGTTGTAATGTTTTCGATGGTTTGTGGCGTTTTTATCTTCTCTGCATGTCTAAAGCAGATAAGCACTCAAGCTAGGACTACATTTGTGGATTTTAAAGTCATTGACAACCATGCTCAGAGTAGATTGAAGCTAATGAATACTCCTCACCTACTACATTATCCTAAACCTGCATCCTTTAGCAGGAACGAGTGTGCTCATAATCCTGTACTGTTCTTTGCCATATTGTCCAATCAGAGATCAGGTAGTGGGTGGTTTGAGACCCTTTTGAATAGCCACACCAATGTAAGCTCGAATGGGGAGATATTTTCTGTTAGAGAGAGAAGGAAAAATGTGTCTTCAATTTTGCAGACTTTAGATAAAGTTTACAATTTGGACTGGTTCAACAGTGCTTCGAAGAACGAGTGCTCTGCTGCAACTGGATTGAAGTGGATGCTTAATCAGGGATTGATGGAACACCATAAGGAAATAGCGGAGTATTTCGATCGTAGACGTATTTCTGTTATATTTCTTTTCCGGAGAAACTTGCTACGCAGGATGGTATCAATGCTAGCCAATTCATATGATCGTTATGCCAAGCTATTGAATGGAACACACAAGGCTCATGTACACTCTGCAGAAGAGGCGGATATTCTTTCAAAGTACAAGCCTATCATAAATTCGACATCCTTGCTGGATGACTTGAAGGATATGGAGATGAGATCTGCTAAAGCTTTAGAATACTTCAACAGCACTCGGCATATGATTGTGTACTATGAGGATCTTATGAGAAATCACACTAAACTAAAAGATGTTCAAGGGTTCTTAGGATTGCCACAGATGGAGTTAACGAGCCGTCATGTTAAGATACATAGAGGACCCTTGTCAGACCACATTCAGAACTGGGATGACGTTAACAAAACGCTGAAAGGAACCGTTTATGAGAGTTTTCTTGAAGCTGACTATTAG 1308 0.4258 MWASTHLPNHHQRRNKTTSIGNREEGHIVGGGVVLVVCLAWVGFRALNAIWGSALRQSSSKADPFLPLLTHKPSSSSSLSLSLSLSLSLSGTTMVEDICLFYKEVLVMKPPKRSPMLLRTAVVMFSMVCGVFIFSACLKQISTQARTTFVDFKVIDNHAQSRLKLMNTPHLLHYPKPASFSRNECAHNPVLFFAILSNQRSGSGWFETLLNSHTNVSSNGEIFSVRERRKNVSSILQTLDKVYNLDWFNSASKNECSAATGLKWMLNQGLMEHHKEIAEYFDRRRISVIFLFRRNLLRRMVSMLANSYDRYAKLLNGTHKAHVHSAEEADILSKYKPIINSTSLLDDLKDMEMRSAKALEYFNSTRHMIVYYEDLMRNHTKLKDVQGFLGLPQMELTSRHVKIHRGPLSDHIQNWDDVNKTLKGTVYESFLEADY 435
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco4g01095 435 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 193 417 IPR027417 -
Phco4g01095 435 Gene3D - 192 421 IPR027417 -
Phco4g01095 435 PANTHER PROTEIN, PUTATIVE, EXPRESSED-RELATED 93 435 - -
Phco4g01095 435 MobiDBLite consensus disorder prediction 1 22 - -
Phco4g01095 435 Pfam Sulfotransferase domain 195 400 IPR000863 GO:0008146
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco4g01095 Phco-Chr4 8856487 8861017 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco4g01095 4 8856487 8861017 Phco8g00595 8 5948824 5951967 ECH
Phco7g00434 7 3099410 3100986 Phco4g01095 4 8856487 8861017 ECH
Phco4g01095 4 8856487 8861017 Phco4g01095 4 8856487 8861017 ECH
Phco4g01095 4 8856487 8861017 Phco8g00033 8 328048 332373 PCT
Phco8g00595 8 5948824 5951967 Phco4g01095 4 8856487 8861017 PCT