Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco4g01035 ATGCGGATGCACTTGAGGTCGTTCTTTTGCGAGGTTAACCTGTTGATCAGGTTAAGCTCGCAAGTGCAATCTCGTTCCTATGCCCGTCGTCGTGAACCGTTTCTCACAAAAGTTTCTCACTACCTCCACCGTGCCAAACTCATTGACTCCATTAGACTCACTCTACGCTCTAACAACCCCAACTCCTCCCTTCCCTCTCTCATAAACCACCGTCTTTTTGACTCTTTCGTGCTCACTCATGCCCTTCGCTCTGCCCCCTCTGCAGATTCCGCTCTTTCCCTTGTCCATGCCCTCGAAAAGAATTCCAGTTTTTCCCACACCCACCACACACTCCATGCACTTGCAACTGTGCTTGCCAAGGCTGGTAGAGGCTCCGAGCTCAAATCCCTCATTGATGCTATCCGAGCCAACCGATTCGGCACTATTCGGATCAGCTTCATGAATCTCATGCAGTGGCATGCTGCAGCTAAGGACCTTGACACTGTTCTTCAAGTGTGGGAACAGTATACACTGGAGAGCAACCATCTCTGCACTGAATCATATAACATTGTTATGGCTCTTTATGCTCAAATGAAAAAAGACTCGGAGGCTGTACGAGTTTTTCAGAGGATGATTGATGAGGGGTCTCTGCCGAATTGCAGAAGCTTCACTATAATAATCGAGCACCTTGTGAAGTCCCGGAAGTCATCAGAAGCATTGGAAGTTTTTAACCTGTTGCCTTTGATGAGGGTCAAACGCACTTTGAAGCAGTACTCCGTTCTGCTTGAGGGTTTTGTAGGTAGCAAACTGTTTGATGAAGTGAGAATTTTAGTTGATGAAATGCAGGTTGATGGAATACTTCCTAGTAGAGGCGTGAGTTTGTTGCTGCAGCAGATGAAGGAGGAAGGAATTCTTGAGGATAAGGAGCAATTACTGCGAGGAATTCTGCCTGATGAGAGAATCAGGAGTGTAAGTTATTCTATTGATAGTGGGGATGAGGATGAGGATGAGAAAGAAAATGAGAGTGAAGATGAGAATATAAATGATGCTAGTCAATGTGATCTTGTTGGTGGAGTTCATTTAAAACCGTGGCTGGACCCACGGGCTTTGGTCAGTGGCTTGCGGAATTGGAGTCCTGATGAGGTAGCAGCACTAGAGGGTGCAAACTTTGTTTGGACAACAAGGTTGATTTGCAAGATGCTTAGAAACTTCAAAACACCAGAAGCTGCATGGAGTTTCTTCTGCTGGGTTGCTAATCAAAGTGGATTTACTCATGACATATACACGGTACAAAGAATCATGACCCTACTAGCACGCCATGGGCGTACTGAATTGGTTAATACACTCATCTCCAAGATCAGAATGGAGGGAATGAGACTACCATTCAGCACCATCAGGCTGATCATTGACTTTTATGGGATTTCAAAAAATGCTGATGCTGCTATGAAGGTTTTCAATGATGATCGAATTCTTTGCGGTCCCATATCAAATGTTAACCTGATGCTGCTGTATTCGTCTCTTCTAAGAACATTGGCGAAGTGTGGAAGAAACTCCGATGCCTTGGATATGCTTGATGACATGATTTTAAATGGTATTTGCCCAGATATCCAGACATTTTCAGGCCTAATGCTCCACTTTTCACAGCTTGGGGACATAAAAACAGTGCAAAAGCTCTTTGCAATGGTTAGGCAGAGCGGTCTAGAGCCAGATGCTTATTTGTTTAAGGTATTAATCCAAGGTTATTGCAAGTCAAACAGAGCTGCACTAGCATGGAGGCTATTTGAAGACATGAAGAATTCTGGTTTATTGCCTGACTCTGCCACCAAAGAGTTGCTAGTGAAGAGTCTCTGGAAAGAGGGGAGACGAAGAGAGGCTGCAGCAGTGGAAGAGAGTTGTGAGGAAATAAATACGGTTCTTCCACTTGCATTGCAGGGTCATGAATGGACTGTCAGCTCTGCAGATCTCTCAAGAGTTTATAATATTTATTCTAACTCTTTTGCTTAA 1983 0.4448 MRMHLRSFFCEVNLLIRLSSQVQSRSYARRREPFLTKVSHYLHRAKLIDSIRLTLRSNNPNSSLPSLINHRLFDSFVLTHALRSAPSADSALSLVHALEKNSSFSHTHHTLHALATVLAKAGRGSELKSLIDAIRANRFGTIRISFMNLMQWHAAAKDLDTVLQVWEQYTLESNHLCTESYNIVMALYAQMKKDSEAVRVFQRMIDEGSLPNCRSFTIIIEHLVKSRKSSEALEVFNLLPLMRVKRTLKQYSVLLEGFVGSKLFDEVRILVDEMQVDGILPSRGVSLLLQQMKEEGILEDKEQLLRGILPDERIRSVSYSIDSGDEDEDEKENESEDENINDASQCDLVGGVHLKPWLDPRALVSGLRNWSPDEVAALEGANFVWTTRLICKMLRNFKTPEAAWSFFCWVANQSGFTHDIYTVQRIMTLLARHGRTELVNTLISKIRMEGMRLPFSTIRLIIDFYGISKNADAAMKVFNDDRILCGPISNVNLMLLYSSLLRTLAKCGRNSDALDMLDDMILNGICPDIQTFSGLMLHFSQLGDIKTVQKLFAMVRQSGLEPDAYLFKVLIQGYCKSNRAALAWRLFEDMKNSGLLPDSATKELLVKSLWKEGRRREAAAVEESCEEINTVLPLALQGHEWTVSSADLSRVYNIYSNSFA 660
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco4g01035 660 MobiDBLite consensus disorder prediction 320 342 - -
Phco4g01035 660 Gene3D Tetratricopeptide repeat domain 77 348 IPR011990 GO:0005515
Phco4g01035 660 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 528 562 IPR002885 -
Phco4g01035 660 Gene3D Tetratricopeptide repeat domain 381 486 IPR011990 GO:0005515
Phco4g01035 660 MobiDBLite consensus disorder prediction 323 341 - -
Phco4g01035 660 PANTHER OS01G0167750 PROTEIN 3 659 IPR044175 -
Phco4g01035 660 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 493 527 IPR002885 -
Phco4g01035 660 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 177 211 IPR002885 -
Phco4g01035 660 Gene3D Tetratricopeptide repeat domain 492 652 IPR011990 GO:0005515
Phco4g01035 660 NCBIfam pentatricopeptide repeat 180 213 IPR002885 -
Phco4g01035 660 NCBIfam pentatricopeptide repeat 567 599 IPR002885 -
Phco4g01035 660 NCBIfam pentatricopeptide repeat 497 529 IPR002885 -
Phco4g01035 660 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 563 597 IPR002885 -
Phco4g01035 660 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 247 281 IPR002885 -
Phco4g01035 660 Pfam PPR repeat 497 525 IPR002885 -
Phco4g01035 660 Pfam PPR repeat 251 279 IPR002885 -
Phco4g01035 660 Pfam PPR repeat 180 208 IPR002885 -
Phco4g01035 660 Pfam PPR repeat 215 238 IPR002885 -
Phco4g01035 660 Pfam PPR repeat family 562 609 IPR002885 -
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco4g01035 4 8205973 8207955 Phco4g01035 4 8205973 8207955 ECH