Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco4g01006 ATGTTAACAATGGAGCCTCAAAAAAAAGCTTTGCCATTATCTTGGATCTTGATCTTCTTCTTTATCACTTCCTTGTGTGGGGTGAAGGCATCAAAGGAAGGGCAGCATGGCAAGCCTCAAGAGGGACCTGTGGTGGAAAAGGATCAGAGGAGGACATTACTTGTCACCGAATTCGGACAGATAACCGCCCTTGACATCAAGGAAGAACCAGAGAAACTGCCCTACCATCTTCAGTTCATCACATTGGAGCCAAACTCGCTATTTCTTCCTGTGCTTCTACATGCAGATATGGTCTTTTATGTTCATACAGGGAGTGGAAAGCTGACTTGGGCAAATGATGATGGTACTGGCACGATGCCTTTACGCGAAGGAGATCTTTGCAATCTCAGCGAAGAAACTGTTTTCTATATACAGAGCGACTTAGAGGCTGAGAGAAGGAAACTTAGGATTTATGCAATGTTCACCAATACAGAAGACAATACTTTTAATCCATCAATCGGTGCTTATTCAAGAATCGACGAACTGGTCAAGGGCTTTGATAAGAAAATCATGCAAGCAGCTTTAAAGGTGCCAGATGATTTGATTGAAGAAATCATGAACAAGAAAAACACCCCAACTATAGTGCATGCGGATTCAAAGAAGATAAATATTGTCCAGAAACTGGAGGCTTCGTTTCTTAAAAACTTTCTAGGTGTTGGGTCCAACTCCAACAAACTCGAAACATACAACATCTTAGATCATGACCCTGACTTCAAAAATCGTAATGGTTGGAGTGTAGCTGTGTCCAAAACGCAACTAAAGTCATTGAAGCGGACCAACATTGGATTTCTGATGGTGCATTTGACCATGGGATCAATTTTGGGGCCTCATTGGAACCCGAAGGCAGCAGAGTTGGCAGTGGCAGTAGAAGGGAAAGGCATGGTCCGAGTAGTACGTGGAAGCAGCAATGAAGATGAGACAGAAAGCCAAAACATGAGATTTAAGGTTAACGCGGGCGATGCTTTTGTGGTGCCTAGGTTTCATTCAATGGCTCAGATGTCATTCAACGATGAACCGTTTGTTTTTCTTGGCTTCAGCACTTCAGCAAAGAACAACCATCCTCAATTTTTGGCGGGAAAGGGATCTGTGCTTCATAATCTGGATAAGCAGATACTGGCCACCTCTTTTGGTGTGAGTGACAGAACCATGGACGAGCTTTTGCGTTCTCCCAGAGATTCCATCATTTTCGGGTGCAGTTCCTGCGCGGAGGAAGAGGAGGAGATAATGAAGGAAGAAAGGGAGATGAAGAGAGAGGAAGAGGAGGAAGACAGGAAGAAAGAGAGAGAGAGGAAGAGAGAGGAAGAGGAAGCTAAAAGAGAACAGGAAGAGAGGGAAAAGAAGCGTGAGGAGGAAGAAGAGAGGGAGCAGCAAGAAGGAACTGGGAGAGAGGAAGAGGAGGAAGACAGGAAGAAAGAGAGAGAGAGGATGAGAGAGGAAGAGGAAGCTAAAAGACAACAGGAAGAGAGGGAAAAGAAGCGCGAGGAGGAGGAAGAAGAGAGGGAGCAGCAAGAAGGGACTGGGAGAGAGGAAGAGGAGGAAGACAGGAAGAAAGAGAGAGAGAGGAAGAGAGAGGAAGAGGAAGCTAAAAGAGAACAGGAAGAGAGGGAAAAGAAGCGTGAGGAGGAAGAAGAGAGGGAGCAGCAAGAAGGAACTGGGAGAGAGGAAGAGGAGGAAGACAGGAAGAAAGAGAGACAGAGGATGAGAGAGGAAGAGGAAGCTAAAAGACAACAGGAAGAGAGGGAAAAGAAGCGCGAGGAGGAGGAAGAAGAGAGGGAGCAGCAAGAAGGAACTGGGAGAGAGGAAGAGGAGGAAGACAGGAAGAAAGAGAGAGAGAGGAAGAGAGAGGAAGAGGAAGCTAAAAGACAACAGGAAGAGAGGGAAAAGAAGCGTGAGGAGGAAGAAGAGAGGGAGCAGCAAGAAGGAACTGGGAGAGAGAAAGAATGGGAAAGAGAAGAAGAGATAGAGAAGGAGCAAGAAGAAGCTGGGAGGCAACAGGAGAAGAGGGAAATGAGGAGACAAGAGGAAGCTGAAAGGGAAGGGGAATCAGAAGCAGCAGCACAGAAGGAGCAAGCAGAAGCTAGAAGAGAGCATGAAAAGAGAGAAAAGAAGCGACAGGAGGAGGGACAAAGGAAAGGAGAAGAAGTAGTAGCACAACGGGAGCAAGAACAAGCCAAGAGACAACAAGAAGAGAGGGAGAAGAGAAGAGAGGAAGAGGGTATTGAAAGTCAAGCAGAAGAGAATAGCTACAAGAGCAGTTTCGAAGGAAGGAGAGCTCTGAAAGTCAGGAACGTTTGA 2334 0.4619 MLTMEPQKKALPLSWILIFFFITSLCGVKASKEGQHGKPQEGPVVEKDQRRTLLVTEFGQITALDIKEEPEKLPYHLQFITLEPNSLFLPVLLHADMVFYVHTGSGKLTWANDDGTGTMPLREGDLCNLSEETVFYIQSDLEAERRKLRIYAMFTNTEDNTFNPSIGAYSRIDELVKGFDKKIMQAALKVPDDLIEEIMNKKNTPTIVHADSKKINIVQKLEASFLKNFLGVGSNSNKLETYNILDHDPDFKNRNGWSVAVSKTQLKSLKRTNIGFLMVHLTMGSILGPHWNPKAAELAVAVEGKGMVRVVRGSSNEDETESQNMRFKVNAGDAFVVPRFHSMAQMSFNDEPFVFLGFSTSAKNNHPQFLAGKGSVLHNLDKQILATSFGVSDRTMDELLRSPRDSIIFGCSSCAEEEEEIMKEEREMKREEEEEDRKKERERKREEEEAKREQEEREKKREEEEEREQQEGTGREEEEEDRKKERERMREEEEAKRQQEEREKKREEEEEEREQQEGTGREEEEEDRKKERERKREEEEAKREQEEREKKREEEEEREQQEGTGREEEEEDRKKERQRMREEEEAKRQQEEREKKREEEEEEREQQEGTGREEEEEDRKKERERKREEEEAKRQQEEREKKREEEEEREQQEGTGREKEWEREEEIEKEQEEAGRQQEKREMRRQEEAEREGESEAAAQKEQAEARREHEKREKKRQEEGQRKGEEVVAQREQEQAKRQQEEREKRREEEGIESQAEENSYKSSFEGRRALKVRNV 777
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco4g01006 777 Coils Coil 414 655 - -
Phco4g01006 777 SUPERFAMILY RmlC-like cupins 34 402 IPR011051 -
Phco4g01006 777 CDD cupin_7S_vicilin-like_N 53 215 - -
Phco4g01006 777 Coils Coil 723 759 - -
Phco4g01006 777 MobiDBLite consensus disorder prediction 522 559 - -
Phco4g01006 777 CDD cupin_7S_vicilin-like_C 249 406 - -
Phco4g01006 777 MobiDBLite consensus disorder prediction 567 603 - -
Phco4g01006 777 PANTHER OS03G0336100 PROTEIN-RELATED 16 414 - -
Phco4g01006 777 MobiDBLite consensus disorder prediction 476 512 - -
Phco4g01006 777 MobiDBLite consensus disorder prediction 416 777 - -
Phco4g01006 777 Pfam Cupin 242 395 IPR006045 -
Phco4g01006 777 Gene3D Jelly Rolls 233 414 IPR014710 -
Phco4g01006 777 Gene3D Jelly Rolls 35 227 IPR014710 -
Phco4g01006 777 SMART Cupin_1_3 242 397 IPR006045 -
Phco4g01006 777 MobiDBLite consensus disorder prediction 613 777 - -
Phco4g01006 777 MobiDBLite consensus disorder prediction 416 468 - -
Phco4g01006 777 Coils Coil 662 721 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco4g01006 Phco-Chr4 7959102 7962213 Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco4g01006 4 7959102 7962213 Phco4g01006 4 7959102 7962213 ECH