Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco4g00982 ATGTCTGACTCACATCTAACTCTCTACTCTCCTTCTTCCATTCTTGCTCTTTTCCCAATCTTCTTCATCTTCTTCATTCTTATCAAAAGAAAGCAAACCAAACCCAGTCTCAACCTTCCCCCAGGTAACATGGGCTGGCCATTCCTTGGTGAAACCATTGGCTATTTAAAGCCTTATTCTGCCACCACCATAGGGGAATTCATGGAGCAGCACATAGCAAGGTATGGTACAATCTACAAGTCCAAGCTATTTGGGGAGCCGGCAATAGTGTCAGCGGATGCAGGACTCAACAGGTTCATTCTACAGAACGAAGGGAAACTGTTCGAATGCAGCTATCCGAGAAGCATTGGTGGAATACTCGGGAAATGGTCCATGTTGGTCTTAGTCGGCGACATGCATAGAGACATGCGGGTTATATCACTCAACTTTCTAAGCCACGCCAGGCTCAGAACCCACCTCCTGAAAGAGGTGGAGAAACACACCCTCTTGGTTCTAAACTCTTGGAACCAAAATTGCACGTTCTCAGCCCAAGATGAAGCCAAGAAGTTCACCTTCAACCTGATGGCTAAGCATATCATGAGCATGGATCCTGGGGAAATCGAGACAGAGCAACTAAAGAAAGAGTACGTCACTTTCATGAAAGGGGTGGTATCCGCGCCATTGAATCTACCTGGAACTGCTTACCGAAAGGCGTTAAAGTCTAGGTCCACCATACTGAAGTTCATAGAGGGAAAAATGGAAGAGAGGGTGAAGAGAATCCAAGAGGGAAACGAGAGTTTGGAGGAAGACGATCTTCTGAACTGGGTTTTGAAGCACTCGAATCTCTCGACGGAACAAATTCTTGACTTGATTCTCAGTTTGCTCTTCGCTGGCCATGAAACTTCGTCGGTAGCCATAGCTCTAGCCATTTACTTTTTGCCCCGTTGTCCTCAAGCTATGCAACAGTTAAGGGAAGAGCACGGTGAAATTGTCAGAGCCAAGAAACAAGCAGGGGAAGTCGAACTCACTTGGGACGATTACAAAAGAATGGAATTTACTCATTGTGTTGTGAACGAGACACTAAGGTTGGGAAATGTTGTGAGGTTTCTCCACAGGAAGGCTCTGAAAGATGTTAATTATAAAGGTTATGACATTCCATGTGGGTGGAAAGTCCTTCCGGTGATTGCAGCCGTGCATCTGGATCCTTCACTTTTTGACCAACCTCAACACTTCAATCCATGGAGATGGCAGAACAATGGCAGCGGTGGTGGAAGTTGTCCGAGCAACAACAAGAGCACGGCGAACAATAACTTTCTGGCGTTCGGAGGAGGATCACGGCTATGCGCGGGATCAGAGTTAGCGAAGCTCGAAATGGCTGTTTTCATCCATCATCTCATCATCAACTACCATTGGGAATTGGCCGAAACAGATGAAGCTTTTGCCTACCCTTTTGTGGACTTCCCAAAGGGCCTACCCATTAGAGTCCAAGCCCACTCTTTGATCTAA 1485 0.4646 MSDSHLTLYSPSSILALFPIFFIFFILIKRKQTKPSLNLPPGNMGWPFLGETIGYLKPYSATTIGEFMEQHIARYGTIYKSKLFGEPAIVSADAGLNRFILQNEGKLFECSYPRSIGGILGKWSMLVLVGDMHRDMRVISLNFLSHARLRTHLLKEVEKHTLLVLNSWNQNCTFSAQDEAKKFTFNLMAKHIMSMDPGEIETEQLKKEYVTFMKGVVSAPLNLPGTAYRKALKSRSTILKFIEGKMEERVKRIQEGNESLEEDDLLNWVLKHSNLSTEQILDLILSLLFAGHETSSVAIALAIYFLPRCPQAMQQLREEHGEIVRAKKQAGEVELTWDDYKRMEFTHCVVNETLRLGNVVRFLHRKALKDVNYKGYDIPCGWKVLPVIAAVHLDPSLFDQPQHFNPWRWQNNGSGGGSCPSNNKSTANNNFLAFGGGSRLCAGSELAKLEMAVFIHHLIINYHWELAETDEAFAYPFVDFPKGLPIRVQAHSLI 494
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco4g00982 494 PRINTS E-class P450 group I signature 279 296 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Phco4g00982 494 PRINTS E-class P450 group I signature 387 411 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Phco4g00982 494 PRINTS E-class P450 group I signature 441 464 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Phco4g00982 494 PRINTS E-class P450 group I signature 431 441 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Phco4g00982 494 PRINTS E-class P450 group I signature 72 91 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Phco4g00982 494 PRINTS E-class P450 group I signature 299 325 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Phco4g00982 494 PRINTS E-class P450 group I signature 347 365 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Phco4g00982 494 PRINTS P450 superfamily signature 432 441 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Phco4g00982 494 PRINTS P450 superfamily signature 441 452 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Phco4g00982 494 PRINTS P450 superfamily signature 290 307 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Phco4g00982 494 PRINTS P450 superfamily signature 348 359 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Phco4g00982 494 SUPERFAMILY Cytochrome P450 36 488 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Phco4g00982 494 Gene3D Cytochrome P450 28 490 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Phco4g00982 494 Pfam Cytochrome P450 40 470 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Phco4g00982 494 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 434 443 IPR017972 GO:0005506|GO:0016705
Phco4g00982 494 FunFam Cytochrome P450 90B1 29 490 - -
Phco4g00982 494 CDD CYP90-like 71 488 - -
Phco4g00982 494 PANTHER CYTOCHROME P450 26 35 469 - -
Phco4g00982 494 Coils Coil 243 263 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco4g00982 Phco-Chr4 7760756 7764548 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco4g00982 4 7760756 7764548 Phco4g00982 4 7760756 7764548 ECH
Phco4g00982 4 7760756 7764548 Phco8g00491 8 4663071 4667181 PCT