Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco4g00975 ATGGTGCACAGCGCGTACGATTGCGTGGAGCTGGTGCGCGAGTGCCCTGCCAAAATCGAATCCATCGAATCCTACGGTTCGAAGCTCCTCCTGGGTTGCTCCGATGGATCGCTCCGAATATTCGCGCCGGAAACGGAATCCTCCTCCGACGGCTCCAACTCCTACGCGTTGGAGAGGAACCTTGTCGGGTTCGCGAAGAAGCCCGTGCTATCAATGACGGTGGTGGAGTCGCGAGAGTTCCTCATATCGCTCTCTGAATCCATCGCATTCCACAGACTCCCTTCCTTCGAGACCATCGCGGTCATAACCAAGGCCAAGGGTGCCAACGTCTTCAGCTGGGACCACCGCCGAGGCTTCCTCTGCTTCGCCAGGCAGAAGCGCGTTTGCATCTTCAGACACGACGGTGGCAGGGGATTTGTGGAGGTGAAAGAGTATGGCGTGGGGGATACGGTGAAGTCCCTGTGTTGGTGCGGCGAGAATATATGTTTGGGGATTAGAAGAGAGTATGTGATTCTGAATTCTTCAAATGGAGCTTTGTCTGAGGTTTTCACTTCCGGGAGACTAGCGCCTCCTCTGGTCGTTTCTCTTCCCAGTGGAGAACTTCTTCTTGGAAAGGAGAATATTGGGGTTTTTGTGGACCAAAATGGGAAGCTTCTTCCCGAAGGTAGGATTTGCTGGTCTGAGGCTCCTTTGGAAGTTGTGATTCAGAAGCCGTATGCTATAGCTTTGCTGCCCAGATTTGTGGAGATTCGATCCCTTCGAGCTCCTTATCCGTTGATACAGACAGTTGTTCTTCGAAATGTTCGCCACCTTTGCCAGAGCAATGATTCCATGATACTTGCTTTGGATAATTCAATTCATGGCCTCTTCCCTGTTCCCCTTGGAGCCCAGATAGTCCAATTAACAGCTTCTGGCAACTTTGAGGAGGCCTTGTCATTGTGCAAACTTCTTCCACCTGAAGATTCAAGTCTCCGTGCTGCAAAGGAGGGTTCAATTCATATAAGATACGCTCACTATCTTTTTGAGAATGAGAGCTATGAAGAGGCTATGGAACATTTTCTGGCATCTCAAGTAGATATAAACCATGTGCTTTCCCTGTATCCATCCATTATTCTTCCAAACACAACTATTGTTCACGAGCTAGAAAAGTTGGACATTTATGGCGATGCTTCATATCTCTCAAGAGCTTCTTCAGGTGTGTCAGATGATATGGAACCCTCATCAACTTCTCATATGTCAGAATCTGATGAGAATGCAGCACTTGAATCAAAAAAAATGAACCATAATATGCTTATGGCTCTCATAAAATACTTACAGAAGAAGAGATATAGTTTTATTGAGAAAGCCACTGCTGAAGGAACTGAAGAAGTCGTTTTAGATGCTGTTGGGGATAACTTTGCATCTTACAATAGGCTTAAGAAATCAAACAAGGGGCGTGGTAGTATGCCTGTTAGTTCTGGAGCTCGGGAGATGGCTTCAATATTGGATACTGCTTTACTCCAAGCATTGCTTCTAACTGGACAACCTTCAGTGGTTTTAGAGTTATTGAGAGGTGTTAACTACTGTGATTTGAAAATATGTGAGGAAATACTTCGAAAAGACAACCACAGTGTTGCTTTATTAGAACTTTACAAGCACAATTCACTGCACCGGGAGGCTCTTGAACTTCTTCACAAATTGGTGGATGAGTCAAAATCTAGCCAGTCTAAAATTACACAAAGATTCAAGCCTGAGGATATTGTGGAGTATCTCAAGCCGCTCTGTGGGACAGACCCCATACTTGTACTAGAGTTCTCAATGCTTGTTCTTGAAAGCTGCCCATCTCAAACTATAGAGCTCTTTCTGTCTGGAAACATTCAAGCAGATATGGTGAGCTCATATTTGAAGAAGCATTCTCCAACCATGCAAGCTAGGTACTTGGAGCTCATGCTTGCAATGAATGAGAATGCGGTATCTGGCAATTTGCAGAATGAAATGGTGAACATATATCTTTCTGAAGTACTCGATTGGCATGCTGGTTTATGTGCTTCAAAAAAATGGGACGAGAAAGATTATTCCCCAACAAGAAAAAAATTATTGTCTGCCTTGGAGACCATTGCAGGATACAATCCAGAGGCTTTGCTAAAACGTCTTCCACCAGATGCTTTATATGAAGAGCGTGCGATATTGTTGGGAAAAATGAACCAACATGAACTGGCATTATCTTTGTATGTTCACAAGCTCAATGCTCCAGAACTGGCACTGTCATATTGTGATCGAGTCTATGAGTCTATGCACCAGCCATCTGCAAAATATTCCAGTAACATATACCTTGTGCTTTTGCAAATTTATTTGAATCCTCGAAGGACCACAGCAGGTTTTGAAAATAGAATTACAAATCTATTAACCCCACAGAATAAAACTATTCCAAAGCTTACTTCTACGCCATCCATAAGAAGTAGAGGTCGAGGGTCTAAGAAAATTGCTGCAATAGAGGGTGCAGAGGACACAAAAGTTAGTTTAAGCAGCACTGACAGTGGCAGGAGTGATGGTGATGCAGATGACTATAGTGAGGGTGGTTCTACTACTATCATGCTCGATAAGGTCCTTGATTTGTTAAGCCGCAGGTGGGATAGAATAAATGGAGCTCAGGCCCTTAAACTTCTACCGAAAGAGACAAAATTACAGGACCTGCTTTCATTTCTTGGACCCCTTTTGAAAAAATCAAGTGAAATGTACCGAAACTGTTCGGTGATCAAGAGCTTGAGACAAAGTGAGAACCTTCAGGTGAAAGATGAACTGTATAGTCAGAGGAAAGCAGTTGTGAAGATAACCGGTGATAGCATGTGCTCTCTGTGCCATAAAAAAATAGGGACTAGTGTTTTTGCTGTCTACCCAAATGGTAGCACTCTCGTGCACTTTGTCTGTTTCAGAGATTCTCAAAATATGAAAGTGGCAGGCAAAGGGTCTCAATTGAGGAAGCGATTATGA 2970 0.4407 MVHSAYDCVELVRECPAKIESIESYGSKLLLGCSDGSLRIFAPETESSSDGSNSYALERNLVGFAKKPVLSMTVVESREFLISLSESIAFHRLPSFETIAVITKAKGANVFSWDHRRGFLCFARQKRVCIFRHDGGRGFVEVKEYGVGDTVKSLCWCGENICLGIRREYVILNSSNGALSEVFTSGRLAPPLVVSLPSGELLLGKENIGVFVDQNGKLLPEGRICWSEAPLEVVIQKPYAIALLPRFVEIRSLRAPYPLIQTVVLRNVRHLCQSNDSMILALDNSIHGLFPVPLGAQIVQLTASGNFEEALSLCKLLPPEDSSLRAAKEGSIHIRYAHYLFENESYEEAMEHFLASQVDINHVLSLYPSIILPNTTIVHELEKLDIYGDASYLSRASSGVSDDMEPSSTSHMSESDENAALESKKMNHNMLMALIKYLQKKRYSFIEKATAEGTEEVVLDAVGDNFASYNRLKKSNKGRGSMPVSSGAREMASILDTALLQALLLTGQPSVVLELLRGVNYCDLKICEEILRKDNHSVALLELYKHNSLHREALELLHKLVDESKSSQSKITQRFKPEDIVEYLKPLCGTDPILVLEFSMLVLESCPSQTIELFLSGNIQADMVSSYLKKHSPTMQARYLELMLAMNENAVSGNLQNEMVNIYLSEVLDWHAGLCASKKWDEKDYSPTRKKLLSALETIAGYNPEALLKRLPPDALYEERAILLGKMNQHELALSLYVHKLNAPELALSYCDRVYESMHQPSAKYSSNIYLVLLQIYLNPRRTTAGFENRITNLLTPQNKTIPKLTSTPSIRSRGRGSKKIAAIEGAEDTKVSLSSTDSGRSDGDADDYSEGGSTTIMLDKVLDLLSRRWDRINGAQALKLLPKETKLQDLLSFLGPLLKKSSEMYRNCSVIKSLRQSENLQVKDELYSQRKAVVKITGDSMCSLCHKKIGTSVFAVYPNGSTLVHFVCFRDSQNMKVAGKGSQLRKRL 989
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco4g00975 989 Pfam Vacuolar sorting protein 39 domain 2 863 971 IPR019453 -
Phco4g00975 989 ProSiteProfiles Clathrin heavy-chain (CHCR) repeat profile. 598 785 IPR000547 GO:0006886|GO:0016192
Phco4g00975 989 MobiDBLite consensus disorder prediction 398 416 - -
Phco4g00975 989 Pfam Vacuolar sorting protein 39 domain 1 495 603 IPR019452 -
Phco4g00975 989 Pfam CNH domain 26 273 IPR001180 -
Phco4g00975 989 PANTHER CNH DOMAIN CONTAINING 1 977 IPR032914 GO:0016192
Phco4g00975 989 MobiDBLite consensus disorder prediction 398 419 - -
Phco4g00975 989 SUPERFAMILY WD40 repeat-like 25 167 IPR036322 GO:0005515
Phco4g00975 989 MobiDBLite consensus disorder prediction 827 850 - -
Phco4g00975 989 ProSiteProfiles Citron homology (CNH) domain profile. 16 278 IPR001180 -
Phco4g00975 989 Pfam Region in Clathrin and VPS 624 753 IPR000547 GO:0006886|GO:0016192
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco4g00975 4 7686168 7692999 Phco4g00975 4 7686168 7692999 ECH