Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco4g00971 ATGGAGGCCGAAGCTATCGCCATGGAATCAATGGAGTTAAAGGTGTCCGAGCTATTGAAAGAGGTCAACGTAGATTACACTCCTCAGTTCACTAAGCTCGTTGACAACACCGTTTCCGCCATCAAAGCCTCCATTGACAAAATCCCCAACAATTTCAGGGTAACTGCAGATTTAGCATCAGGCTTTGTTGCGGACATTGGCGCCGATAAGGTCGAGTTTAAGTTTAAGAAACCAGAGTTTATTAAGACTGGTGGAAGTTACTCCATACAGAGTATTGCTAGGCCTGAAGTTAATGCTGATCTAATTATCAGGTTACCAAAGGAATGCTTCCATGAGAAGGATTATTTAAATTACAGATACTATGCCAAGAGGTGTCTGTATTTGTGCTTGATAAAAAAGTATCTGGAGAGGTCTTCATCTATTGACAGGGTTGAATGGTCCACTATACAGAATGAAGCCAGAAAACCCTTGCTCGTTGTGTATCCAGCTGCGAAGCTTGTTGAGGTTCCTGGTTTTTTTGTAAGAATTATTCCGTCCGCGAAGGCTATATTTAGCATAGCGAAGTTGAACCTGAAGCGCAACAACATTCATAACTTGAGTAATGGGATTGATCTTCAGGCTACACCGAAGTACAACTCGAGTATTCTGGAAGACATGTTTATAGAGGAGGCTGACTTCATCAACAAGTATTTTATTGGATGGAAGGAACTACGAGAGGCTTTAATCCTGCTTAAGGTTTGGGCCCGACAAAGAAGTTCAGTATATGTTCATGATTGCCTGAATGGGTTTTTGATTTCTGTCATACTGGCATATCTTGCTTCTAAGCAACATATTAGCAATTCAATGAAGGCAACTGAAATAATTCGCGTCACCTTGAACTTCATTGCCACCTCAGAGTCGTGGAGCCGAGGTTTCTACTTTCCAAACGAAGGCCAGATCCATATTACAAAAGAGCAAAAGATTCAACTTAAAGAGTCATTTCCAATTGTCATATGTCATCCTTCTGGAGGATTCAATCTAGCTTTCCGAATGTCTAGGAATGGTTTTACTCGGCTCCAGGATGAGGCTGCTATGACACTTAGGTGCTTAGAAAAGTGTAGAGATGGTGGATTTGAGGAAGTTTTTATGACCAAGATTGACTATGCTGTTAAATATGATTACTGTATGAGAATAAATTTGAAGGGAAAGAAGGAGGTCTGTGCAATGGGATTTTGTTTGGATGATGAGTGCTGGAGATCATACGAGGATAAGATACATGGTATTTTATCTAAAGGGTTAAATGATAGAGCAAAAGTCATTCAAGTTACATGGAGAAATACACAATGCCAGTGGAGTGTGGACGATGGCTTGTCGGTATTTGATAAAGAGCCCTTGTTCATAGGAATTTCAGTGAGTACTTTGGAGAAAGCATATAGGATGGTTGATATTGGCCCAAATGCCGAAAGTAAAGAAGAGGCTCTTGAATTTCAAAAGTTTTGGGGAGAGAAAGCAGAGCTTAGAAGATTTAAAGATGGCAGAATTGCAGAAAGCACAGTATGGGAATGTGAGCAATGGGCTAGACATCTTGTTTTGAAAAGAATAGCTGAGCATGTACTTAGTCGACATCTTTCTCTATCCAAGGAAAATATTGTAGTTGTTGTGGATCAACTTGATTTCTCTTTGCTTCATGGTGCTAGAGATCCTATATCATACTCTAGTAGTTTGCTTGGGGCATTTGATGTTTTATCAAAGCGCTTGCGTCTTATTGAAGACCTTCCTTTGAAGGTGTCCAGTGTACAGCCTTTAGACTCTGCTTTCAGGTTTGCATCGGTATTCCCTCCTGAACCTCATCTTCTAGCTAATGAAAAAATTGAATCTCTCAGATTGAGTAAGTTTGTTCCATCATGCGTTCAAGCACTGGAAGTTTTGATTCAGCTGGAAGGTTCTGGGAACTGGCCAATGGATGAAATTGCAATTGAAAAAACAAAATCTAGCTTCCTTTTTGAAATTGGATTGAGTCTTCAAAAGACGTGGGGGATGACATGCACTGCCACTGAGGATAATGTGGATGTGTTAATGTCAGGATATGCTTTTCGTCTAAAAATTTTGCACGAGAGAGGCCTTAGTTTGCTAAAAAAGGAAATTGGGGATTATCAGGCTAAGCAAGTTCCTTCTGTTGACAAGAAACTTTTTATCCGTAGTCAGCATGCTAACATGATCAATGGATTACAAAGTCGTTATCCAGTATTTGGACCAGTAGTTAGACTTGCAAAACGATGGGCTGCTTCACATCTATTTTCAGCTTGCATGGTAGAAGAGGCTGTCGAACTATTGGTTGCATATCTTTTTCTTAATCCTTTGCCATTTGATGTTCCCTGTTCGCGGATCACTGGGTTTTTGAGGTTCCTGCGGCTACTCTCACACTATGATTGGACTTTCTCTCCGCTGGTTATTGACATAAATAATGACTTGAGCCAAAGTGACGAGAAAGAAATAAATGACAACTTTTTGCTAAGAAGAAAAAGTCAGGGAGAGAGTGGACAAAGTGTAGGGCCAGCAATGTTCTTAGCTACAGTTTATGATAAAGAATCTGAGGCTTGGACTGGATTATCACCTAGTGGAATGGAACTGAAAAGGTTAGTTGCATATGCTCGAAGCAGTGCCAATTTGCTGACAAAGCTCACATTTCAAGAAGAGATTGGTCCATATAGATGGGAGTGCCTATTCAGGACTCCTTTAAACAATTATGATGCAGTAATTATTCTCCACAAGGACAATCTCCCGTATCCCCAAAGGCTTCTCTTCCCTTCAGAAGTTAATCATGGAATACATGTTGCAGAAGGACAAGCCAGCAAGTGTTTTCAACCCTTTTTGTTGCCTAAAGATTTGAAGGGCAGGCCAGAGGAACTTAAAAATAAGTTGCTGGTAGATTTTGATCCATCAAAGTGCTTTATCAGAGATTTAAAGCTTGAGTTCTCAGCCTCATTCAAAGTATGGCATGATTATCTGGGAGGGGATATTATTGGCCTAACATGGGGGGAATCATATTCTTCCAAGAAGCGGAAGCACGAGGAAGTAGTTGATGAAGAAGAAAATCCTTGGAAGGTGTTAAAAGCAGTGGGGGAAATTGGGAAAGGGTTTGTGAGGAGTGTATATTTTCTGAAGCCCCAAGGCTCATGA 3159 0.4058 MEAEAIAMESMELKVSELLKEVNVDYTPQFTKLVDNTVSAIKASIDKIPNNFRVTADLASGFVADIGADKVEFKFKKPEFIKTGGSYSIQSIARPEVNADLIIRLPKECFHEKDYLNYRYYAKRCLYLCLIKKYLERSSSIDRVEWSTIQNEARKPLLVVYPAAKLVEVPGFFVRIIPSAKAIFSIAKLNLKRNNIHNLSNGIDLQATPKYNSSILEDMFIEEADFINKYFIGWKELREALILLKVWARQRSSVYVHDCLNGFLISVILAYLASKQHISNSMKATEIIRVTLNFIATSESWSRGFYFPNEGQIHITKEQKIQLKESFPIVICHPSGGFNLAFRMSRNGFTRLQDEAAMTLRCLEKCRDGGFEEVFMTKIDYAVKYDYCMRINLKGKKEVCAMGFCLDDECWRSYEDKIHGILSKGLNDRAKVIQVTWRNTQCQWSVDDGLSVFDKEPLFIGISVSTLEKAYRMVDIGPNAESKEEALEFQKFWGEKAELRRFKDGRIAESTVWECEQWARHLVLKRIAEHVLSRHLSLSKENIVVVVDQLDFSLLHGARDPISYSSSLLGAFDVLSKRLRLIEDLPLKVSSVQPLDSAFRFASVFPPEPHLLANEKIESLRLSKFVPSCVQALEVLIQLEGSGNWPMDEIAIEKTKSSFLFEIGLSLQKTWGMTCTATEDNVDVLMSGYAFRLKILHERGLSLLKKEIGDYQAKQVPSVDKKLFIRSQHANMINGLQSRYPVFGPVVRLAKRWAASHLFSACMVEEAVELLVAYLFLNPLPFDVPCSRITGFLRFLRLLSHYDWTFSPLVIDINNDLSQSDEKEINDNFLLRRKSQGESGQSVGPAMFLATVYDKESEAWTGLSPSGMELKRLVAYARSSANLLTKLTFQEEIGPYRWECLFRTPLNNYDAVIILHKDNLPYPQRLLFPSEVNHGIHVAEGQASKCFQPFLLPKDLKGRPEELKNKLLVDFDPSKCFIRDLKLEFSASFKVWHDYLGGDIIGLTWGESYSSKKRKHEEVVDEEENPWKVLKAVGEIGKGFVRSVYFLKPQGS 1052
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco4g00971 1052 Pfam Nrap protein domain 1 100 223 IPR035082 -
Phco4g00971 1052 Pfam Nrap protein PAP/OAS-like domain 237 378 IPR035367 -
Phco4g00971 1052 PANTHER NUCLEOLAR RNA-ASSOCIATED PROTEIN 3 1045 IPR005554 -
Phco4g00971 1052 Pfam Nrap protein domain 3 382 537 IPR035368 -
Phco4g00971 1052 FunFam Nucleolar protein 6 211 381 - -
Phco4g00971 1052 Pfam Nrap protein nucleotidyltransferase domain 4 564 737 IPR035369 -
Phco4g00971 1052 Pfam Nrap protein PAP/OAS1-like domain 5 740 892 IPR035370 -
Phco4g00971 1052 Pfam Nrap protein domain 6 906 1044 IPR035371 -
Phco4g00971 1052 Gene3D - 208 381 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco4g00971 Phco-Chr4 7655649 7664823 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco4g00971 4 7655649 7664823 Phco4g00971 4 7655649 7664823 ECH