Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco4g00962 ATGGCCGCTGCAAGGTTAACCTCATTCGTGGCGGTGACATCCGCTGCGGTGGTTTCCATGTCCACGTTCTCTGATCGTGCCTACGCCGACTCTTCCTTTCGAATCCCTTTCTTCTCTTCTTCCCCTTCCAATGCGCCGTCGCCGCCGAACCAGTCTTCCGACAGCAGTTCGGAGCCTCCGGCGCCCGAGGAACCTAACAAGTCGGGTTTCGACCCGGAATCGTTAGAAAGAGGAGCCAAAGCTCTCCGTGAAATCAACAGTTCTTCCTACTCAAAGCAGGTGTTTGATTTAATGCGAAAGCAGGAGCAAACTCGCCTCGCTGAATTAGACGCTGAGAAAGTTCACTACGAACTTATTCAGTCTCAAGGAGATATTGAGAGGCAGCGGAAAATGGCTGAAGAACAACGTAATTTAATACAAGAGCAAGCCCAGAGACAGGCCCAGGTGCTGCGATATGAGGATGAATTAGCAAGGAAAAGAATGCAGACAGATCATGAAGCCCAGAGGCTACATAATGTTGAATTGGTGAAGATGCAAGAGGAGTCTTCTGTAAGAAAGGAGCGGGCAAGACAGGCTACTGAAGAACAGATTCAATCTCAGCAGCGTCAGACTGAGAGAGAGAGAGCTGAAATAGAAAGAGAAACTATTAGAGTTAAGGCAATGGCTGAGGCTGAAGGCCGAGTACATGAAGCAAAATTGACCGAGGATCATAACAGGAGAATGCTTGTAGAACGACTGCAGGGTGAAAGGGATAAATGGCTTGCTGCAATTAACACAACTTTTAGTCATATTGAAGGTGGTCTAAGGGCCTTATTGACTGATAGGGACAAATTGCTTATGACTGTTGGAGGAGCTACTGCACTAGCTGCAGGAGTATATACAACTAGAGAAGGTGCTAAAGTCACCTGGGGCTATATTAATCGAATTTTAGGGCAGCCATCACTGATCCGGGAATCATCGATGGCAAAATTCCCTGGATCAAAGATAATTTCTCAAGCCAAAAATAAACTTCTAAATAGTAGTACTTTGGCTGGGACAGAAAAGCCTATTGGGAGTAAAAATGGTCTTGGAAATGTAATCCTCCATCCATCGTTGAAGAGAAGAATAGAACATCTTGCACGTGCAACATCAAACACCAAAGCCCATCAGGCACCATTTCGTAACATGCTTTTTTATGGGCCTCCAGGCACTGGTAAAACAATGGTTGCAAGGGAAATAGCGAGAAGATCGGGCTTGGATTATGCCATGATGACAGGAGGAGATGTTGCACCTTTGGGCGCCCAGGCTGTTACCAAAATTCATGATATATTTGATTGGGCCAAGAAATCTAGGAAAGGCCTATTGCTTTTTATTGATGAAGCCGATGCTTTCCTTTGCGAGCGTAACAGCACGCACATGAGTGAAGCTCAGCGAAGTGCTTTAAACGCATTGCTCTTCAGAACCGGTGATCAGTCTCGAGACATAGTACTTGTCCTTGCGACAAATAGACCAGGTGATCTTGACAGTGCAGTTACTGATCGCATTGATGAAGTGATTGAATTTCCGCTTCCAGGAGAGGAAGAGCGTCTAAAGTTATTGAAGCTCTATTTAAACAAATATTTATGTGATGACAACAATGGCTCCAAGGGAGGCTTCTTGCTGAAGAAGCAGCCTCAGAAGATTACTATAGAAGATTTATCCGAAGATGTTTTCAGAGAGGCTGCCAAGAAAACGGAGGGATTTTCTGGCCGTGAGATCGCCAAACTCATGGCAAGCGTTCAAGCTGCTGTCTATGGGCGCCCAGATTGCATCTTGGATTCCCAGTTGTTTAGGGAGATTGTAGATTACAAGGAGGTGGAACATCACCAACGACTAAAACTAGCAGCTGAAGGTGGCCAGCCCGGCCAAATATAA 1893 0.4591 MAAARLTSFVAVTSAAVVSMSTFSDRAYADSSFRIPFFSSSPSNAPSPPNQSSDSSSEPPAPEEPNKSGFDPESLERGAKALREINSSSYSKQVFDLMRKQEQTRLAELDAEKVHYELIQSQGDIERQRKMAEEQRNLIQEQAQRQAQVLRYEDELARKRMQTDHEAQRLHNVELVKMQEESSVRKERARQATEEQIQSQQRQTERERAEIERETIRVKAMAEAEGRVHEAKLTEDHNRRMLVERLQGERDKWLAAINTTFSHIEGGLRALLTDRDKLLMTVGGATALAAGVYTTREGAKVTWGYINRILGQPSLIRESSMAKFPGSKIISQAKNKLLNSSTLAGTEKPIGSKNGLGNVILHPSLKRRIEHLARATSNTKAHQAPFRNMLFYGPPGTGKTMVAREIARRSGLDYAMMTGGDVAPLGAQAVTKIHDIFDWAKKSRKGLLLFIDEADAFLCERNSTHMSEAQRSALNALLFRTGDQSRDIVLVLATNRPGDLDSAVTDRIDEVIEFPLPGEEERLKLLKLYLNKYLCDDNNGSKGGFLLKKQPQKITIEDLSEDVFREAAKKTEGFSGREIAKLMASVQAAVYGRPDCILDSQLFREIVDYKEVEHHQRLKLAAEGGQPGQI 630
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco4g00962 630 SMART AAA_5 385 518 IPR003593 GO:0016887
Phco4g00962 630 Coils Coil 125 145 - -
Phco4g00962 630 MobiDBLite consensus disorder prediction 39 73 - -
Phco4g00962 630 FunFam ATPase family AAA domain-containing protein 3 343 533 - -
Phco4g00962 630 Pfam ATPase family associated with various cellular activities (AAA) 389 516 IPR003959 GO:0005524|GO:0016887
Phco4g00962 630 MobiDBLite consensus disorder prediction 178 210 - -
Phco4g00962 630 MobiDBLite consensus disorder prediction 178 193 - -
Phco4g00962 630 Coils Coil 183 217 - -
Phco4g00962 630 MobiDBLite consensus disorder prediction 39 62 - -
Phco4g00962 630 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 358 610 IPR027417 -
Phco4g00962 630 ProSitePatterns AAA-protein family signature. 488 507 IPR003960 GO:0005524|GO:0016887
Phco4g00962 630 Pfam ATPase family AAA domain-containing protein 3, N-terminal 56 317 IPR021911 -
Phco4g00962 630 Gene3D - 333 534 IPR027417 -
Phco4g00962 630 PANTHER PUTATIVE ATP-ASE 20 624 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco4g00962 Phco-Chr4 7607059 7612373 Dispersed/Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco4g00962 4 7607059 7612373 Phco4g00962 4 7607059 7612373 ECH