Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco4g00924 ATGCTATCATGTGTGGTAGGTTCTTTCAAGAAAAAAGCAATCAATGCCTCAAACATGCTGAGGAATTCTTTGACGAGAAAGGGTAGGCGAAGCAGCAAGGTCATGTCCGTTGAAATTGAGGATGTACACGATGCTGAGGAGTTGAAAATAGTTGATGAGTTCCGTCAAGCTCTTATTTTGGACGAACTACTCCCTGCAAAGCACGATGATTATCATATGATGCTTAGATTCCTGAAGGCCAGAAAGTTTGATATTGAGAAGACAAAGGAAATGTGGTCTGAAATGATCAAATGGAGGAAGGAGTTTGGTGCTGACACTATTCAGGAGGACTTCGAATTCAAAGAAATTGATGAAGTCTTGCAATATTATCCACACGGACACCATGGTGTGGACAAAGAGGGCAGGCCTGTGTATATAGAGAGATTAGGCCAAGTTGATGCCGGGAAAATGATGCAAGTCACAACCATGGATCGCTATATCAAGTACCATGTGAAGGAGTTTGAGAGGACATTCGATGTAAAGTTTGCAGCTTGTTCGATTGCTGCAAAGAAGCACATCGATCAAAGTACAACTATCCTGGATGTGCAGGGAGTGGGGCTTAAGAGCTTCAACAAACATGCTAGGGAACTCGTTACTCGTCTTCAGAAGATTGACGGTGATAACTATCCTGAGACCTTGAACCGCATGTTCATCATCAATGCAGGTTCTGGATTCAGAATACTGTGGAACACCGTAAAATCATTCCTTGACCCTAAGACCACGGCAAAAATAAATGTTCTTGGCAACAAGTTTGACACCAAATTGCTAGAAATAATTGATGCAAGTGAGTTGCCTGAATTTTTGGGAGGTACTTGTACTTGTGCTGATCAAGGAGGCTGTATGCGCTCTGATAAGGGTCCGTGGAAGGATCCAGAAGTATTGAAGATGGTTCAGAGTGGTGCTCACAAATGCTCAAGAAGAGGTGACTCACACGGCGAGGAAGAGAAATCAATTTCTGAGGAACCCGAGACTCCCAAGTCTGAGGCAGCTCCTCCCAAGTCCGAGGCAACTCCCACCACTCAGATTACTCCAGTTGCTGAAGTGTTACTCCAGGTCCCTGCTAAGCCTGTTGAGTTAGCTCCAACGGTTGATACAACTCCTTTGAATAAAGTTGACGTGAAACCTTCCAAGCCTAAGGACGTAGCCCCTGTGGTTGATTCAACTGCTGTAGCAGCAGCAGCATCAACAGGCTTGTCTCCTGCAGAGTTTGCGGCTGTGATGAAACGCATGGCTGAGTTGGAGGAGAAAATGGCCATCATGAATAAGCAGCCTGCAGCCATGCCACCCGAGAAGGAGCAAATGCTGAATACAACTATAACTCGGGCCGATGACTTGGAGAAGCAACTTTTGGCCACCAAGAAGGCTCTGGAGGATTCACTTGTTCGGCAAGAAGAGCTTTCGGCTTACATTGAGAAAAAGAAAAAGAAGAAGAAGAGATTTGTATGTACCCCATCATCTTAA 1500 0.45 MLSCVVGSFKKKAINASNMLRNSLTRKGRRSSKVMSVEIEDVHDAEELKIVDEFRQALILDELLPAKHDDYHMMLRFLKARKFDIEKTKEMWSEMIKWRKEFGADTIQEDFEFKEIDEVLQYYPHGHHGVDKEGRPVYIERLGQVDAGKMMQVTTMDRYIKYHVKEFERTFDVKFAACSIAAKKHIDQSTTILDVQGVGLKSFNKHARELVTRLQKIDGDNYPETLNRMFIINAGSGFRILWNTVKSFLDPKTTAKINVLGNKFDTKLLEIIDASELPEFLGGTCTCADQGGCMRSDKGPWKDPEVLKMVQSGAHKCSRRGDSHGEEEKSISEEPETPKSEAAPPKSEATPTTQITPVAEVLLQVPAKPVELAPTVDTTPLNKVDVKPSKPKDVAPVVDSTAVAAAASTGLSPAEFAAVMKRMAELEEKMAIMNKQPAAMPPEKEQMLNTTITRADDLEKQLLATKKALEDSLVRQEELSAYIEKKKKKKKRFVCTPSS 499
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco4g00924 499 ProSiteProfiles CRAL-TRIO lipid binding domain profile. 115 289 IPR001251 -
Phco4g00924 499 Pfam CRAL/TRIO, N-terminal domain 67 93 IPR011074 -
Phco4g00924 499 SMART sec14_4 115 286 IPR001251 -
Phco4g00924 499 Gene3D - 103 314 IPR036865 -
Phco4g00924 499 MobiDBLite consensus disorder prediction 315 341 - -
Phco4g00924 499 Gene3D - 10 102 - -
Phco4g00924 499 PRINTS Cellular retinaldehyde-binding protein signature 73 95 - -
Phco4g00924 499 PRINTS Cellular retinaldehyde-binding protein signature 242 261 - -
Phco4g00924 499 PRINTS Cellular retinaldehyde-binding protein signature 275 284 - -
Phco4g00924 499 PANTHER CRAL-TRIO DOMAIN-CONTAINING PROTEIN YKL091C-RELATED 7 487 - -
Phco4g00924 499 MobiDBLite consensus disorder prediction 313 354 - -
Phco4g00924 499 SUPERFAMILY CRAL/TRIO domain 115 311 IPR036865 -
Phco4g00924 499 SMART CRAL_TRIO_N_2 70 95 IPR011074 -
Phco4g00924 499 SUPERFAMILY CRAL/TRIO N-terminal domain 44 110 IPR036273 -
Phco4g00924 499 FunFam SEC14 cytosolic factor 103 315 - -
Phco4g00924 499 Pfam CRAL/TRIO domain 121 283 IPR001251 -
Phco4g00924 499 CDD SEC14 116 284 IPR001251 -
Phco4g00924 499 Coils Coil 416 436 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco4g00924 Phco-Chr4 7340735 7344123 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco4g00924 4 7340735 7344123 Phco4g00924 4 7340735 7344123 ECH