Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco4g00902 ATGGAACCGCAGCTACAGCCCAAGCCGGAACCCGCGGTGGAGGTTCATGGAGGGGATATTGAGAAGTCGTATGTCACGGAGGTTCGCAACGTTGACATGGCTGAGGCAAACGACGGTTGTTGCGTCACCGTTTTGAAGCGAAAGCGTGGTCGTCCGGCCAAGGGAAACGGTGTTCCGAAAACCACGGCATCGCCGACTAAGCATAGAAAGGACGAGGAGGATGTTTGTTTCATATGCTTCGACGGTGGAAGCCTCGTTCTCTGCGATCGCCGGGGATGCCCTAAAGCGTATCATCCCTCGTGTATTAAGCGGGACGAGGCGTTTTTTCGCTCAAAGGCCAAATGGAATTGCGGTTGGCATATATGTAGCCTTTGTGGGAAGGGGTCGCATTATATGTGCTATACTTGTACATATTCTTTGTGCAAGGGGTGTACAAAAAGGGCAGATTTTGTCTCTGTCAGAGAAAATAAAGGCTTATGCGGAATATGCAAGAGGACCATAATGCTGGTAGAGAATTGTGCTCAGGGCGATAAGGCAGTGTGTGAAGTGGATTTTGATGACAAGAGCAGCTGGGAGTATCTTTTCAAGGTTTATTGGACATATTTGAAGGAGAAGCTATCTTTGACCATTGATGAGATCCTTGAAGCTAAAAATCCATGCAAAGGGGTTGCGAGATTAGAAGTATCAGGTGTTGCAGCAGGTATTTCATCATTATTTCTCTCTCCAAAGACGGAGCTGCCAATTGACAATATTGCGAATGGTAAATTATGGCATTATCAGGATCCAACTGGGAAGGTTCAAGGACCTTTCTCTTTATTGCAGCTTTATACGTGGAATGTGAGTGGATATTTTCCGGCAGATCTCAGAATATGGAGGATAGATGATACACAAGATAATGCTGCATTGTTAATTGATATGCTGAGTGGGAAGTGCTCAAAACTTGTGTCATTGACATACGACAGCCAGAAGCTGTCTTTGGAGACCAATAGTACATTGGAAAATAAAGAAAGTAGTCAGGATGGTGGTGGTGAGCACAATGTGACAACAAACGGAAATTCTGCAAATCACCAAATTGTTGAGCACTGTGGGGAGCAAAAATTGGTTGATACCTGTACACAATCTAATGGTAAAGATGAATCTGTTAAGAGCAATGGTTGGCACTCTCAGTCTCCGGGTTGGACTATACAAGCAGATGGGAATAATAATGAGGGGCAAAGTGGAAATTCTGAAAGGAGGGAGGATTCACCCAAATGTGCGGATCGTCCTCATTTACATCCTTCACTACCTTCAACTGCATTTTGTGAAAAACTCGAAGAGAATCCCTCTGATAAATTAGAGGAAGTTCATAAGATAGAGGTGAAGTCTGAAGATAATGGAAATTTTGACTTGAACAGAATTTTTGATGGTCAAAGTAATAGTGGACATACTTATCACAAACAATCAGACAGTGAGGATAATTCAGGGCAATCTTCTGGTCAGAACTGGAGTTGCCCTAGTGTAACTAATCCAGTTTGTAACCTATCTACATGGCTTTCAATCTTTGGCGAACCAAATGATTTGGATGAGTCAGTTTCAGATCTGTTGGCTGAAGTGGAGGCAATGGAGTCGCTTGGTGGTGGCCTGGAATCTCCCACTTCGATCATGAAATGTGGTGAGGAGTTGACTGACGGTTCTATAACTGATTGTCTTAGTTTTGCAGATGGGCTTAGCCCAATGCTTGATGCAGCAGGTAAAGGTGATGCACTGAGCTCCTCAGGTGATTTACACTTTCCATTAAAAACCACAACACCAGATGAACCAACTAAGCAAGCCGATGTGGGCCATCAATATCAAAAGATATCTGGGAAGCATACATCAAAGAGTTCAGAAGTTGAGTCTACTTTCTCTAAGATTAGCTGGAATCCAACCATTCAATTTTCCTGGGATCCTCCTAATTGTTGA 1941 0.4374 MEPQLQPKPEPAVEVHGGDIEKSYVTEVRNVDMAEANDGCCVTVLKRKRGRPAKGNGVPKTTASPTKHRKDEEDVCFICFDGGSLVLCDRRGCPKAYHPSCIKRDEAFFRSKAKWNCGWHICSLCGKGSHYMCYTCTYSLCKGCTKRADFVSVRENKGLCGICKRTIMLVENCAQGDKAVCEVDFDDKSSWEYLFKVYWTYLKEKLSLTIDEILEAKNPCKGVARLEVSGVAAGISSLFLSPKTELPIDNIANGKLWHYQDPTGKVQGPFSLLQLYTWNVSGYFPADLRIWRIDDTQDNAALLIDMLSGKCSKLVSLTYDSQKLSLETNSTLENKESSQDGGGEHNVTTNGNSANHQIVEHCGEQKLVDTCTQSNGKDESVKSNGWHSQSPGWTIQADGNNNEGQSGNSERREDSPKCADRPHLHPSLPSTAFCEKLEENPSDKLEEVHKIEVKSEDNGNFDLNRIFDGQSNSGHTYHKQSDSEDNSGQSSGQNWSCPSVTNPVCNLSTWLSIFGEPNDLDESVSDLLAEVEAMESLGGGLESPTSIMKCGEELTDGSITDCLSFADGLSPMLDAAGKGDALSSSGDLHFPLKTTTPDEPTKQADVGHQYQKISGKHTSKSSEVESTFSKISWNPTIQFSWDPPNC 646
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco4g00902 646 CDD PHD5_NSD 75 120 - -
Phco4g00902 646 MobiDBLite consensus disorder prediction 370 430 - -
Phco4g00902 646 Pfam GYF domain 257 297 IPR003169 GO:0005515
Phco4g00902 646 SMART PHD_3 75 121 IPR001965 -
Phco4g00902 646 SUPERFAMILY GYF domain 253 307 IPR035445 -
Phco4g00902 646 PANTHER ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 44-RELATED 501 639 - -
Phco4g00902 646 SMART gyf_5 255 310 IPR003169 GO:0005515
Phco4g00902 646 SUPERFAMILY FYVE/PHD zinc finger 69 126 IPR011011 -
Phco4g00902 646 MobiDBLite consensus disorder prediction 407 421 - -
Phco4g00902 646 MobiDBLite consensus disorder prediction 459 496 - -
Phco4g00902 646 Gene3D - 256 312 IPR035445 -
Phco4g00902 646 MobiDBLite consensus disorder prediction 464 496 - -
Phco4g00902 646 MobiDBLite consensus disorder prediction 370 406 - -
Phco4g00902 646 ProSiteProfiles Zinc finger PHD-type profile. 73 139 IPR019787 -
Phco4g00902 646 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 68 164 IPR013083 -
Phco4g00902 646 ProSitePatterns Zinc finger PHD-type signature. 76 136 IPR019786 -
Phco4g00902 646 MobiDBLite consensus disorder prediction 329 352 - -
Phco4g00902 646 FunFam Zinc finger CCCH domain-containing protein 19 65 165 - -
Phco4g00902 646 ProSiteProfiles GYF domain profile. 254 308 IPR003169 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco4g00902 Phco-Chr4 7092571 7096058 Proximal
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco4g00902 4 7092571 7096058 Phco4g00902 4 7092571 7096058 ECH