Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco4g00886 ATGTCTGCCGTTAACGAAGAAGCTCCCGCTCCCGCTCCCGCTCCGGTTGTGGAAAAATCACTCGAGGAGGTGAAGGCGAAGGAGAAAAAACCTAAGGCTCCTAAAGAGAAGAAGCCGAAACAGGCTAAAACTGCTTCACATCCTCCATATTTTCAGATGATTAAGGAGGCTTTGGTGGCCCTGAACGAGAAGGGAGGATCGAGCCCATATGCCATAGCGAAGTACATGGAAGAGAAACACAAGGCGGTGCTCCCAGCGAATTTTAAGAAGATTTTAGGTCTGCAATTGAAGAACCAAGCCACCAGAGGAAATCTCGTCAAGATCAAGGCCTCTTACAAGCTTTCTGAATCCGCAAAGAAAGATAAGACGGAGAAGGTGGAGACTAAGGCCAACGCTGAGAAGAAGAAAGAATCACGTCCAAAACGTGGCAGTAGCAGAACCACGGCTGCGCCGAAGAGCAAGAAGACAACCGAGGCGGTTAAAAAGGCCGGGAAGAAGGTTGGGCCAAAGAAGAGTAAGAAGGTATCAACGCCTGCGAAGCCTAAACAGCCCAGGTCCATTAGGTCTCCTTCCAAAAGGGCCCGGAAGGCTATGGGTACTGTGGCCTGA 609 0.5025 MSAVNEEAPAPAPAPVVEKSLEEVKAKEKKPKAPKEKKPKQAKTASHPPYFQMIKEALVALNEKGGSSPYAIAKYMEEKHKAVLPANFKKILGLQLKNQATRGNLVKIKASYKLSESAKKDKTEKVETKANAEKKKESRPKRGSSRTTAAPKSKKTTEAVKKAGKKVGPKKSKKVSTPAKPKQPRSIRSPSKRARKAMGTVA 202
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco4g00886 202 MobiDBLite consensus disorder prediction 1 49 - -
Phco4g00886 202 ProSiteProfiles Linker histone H1/H5 globular (H15) domain profile. 46 116 IPR005818 GO:0000786|GO:0003677|GO:0006334
Phco4g00886 202 SMART h15plus2 44 111 IPR005818 GO:0000786|GO:0003677|GO:0006334
Phco4g00886 202 Gene3D - 41 125 IPR036388 -
Phco4g00886 202 CDD H15 44 123 IPR005818 GO:0000786|GO:0003677|GO:0006334
Phco4g00886 202 PRINTS Histone H5 signature 173 190 IPR005819 GO:0000786|GO:0003677|GO:0006334|GO:0030527
Phco4g00886 202 PRINTS Histone H5 signature 135 149 IPR005819 GO:0000786|GO:0003677|GO:0006334|GO:0030527
Phco4g00886 202 PRINTS Histone H5 signature 33 54 IPR005819 GO:0000786|GO:0003677|GO:0006334|GO:0030527
Phco4g00886 202 PRINTS Histone H5 signature 60 77 IPR005819 GO:0000786|GO:0003677|GO:0006334|GO:0030527
Phco4g00886 202 Pfam linker histone H1 and H5 family 47 113 IPR005818 GO:0000786|GO:0003677|GO:0006334
Phco4g00886 202 SUPERFAMILY "Winged helix" DNA-binding domain 43 125 IPR036390 -
Phco4g00886 202 FunFam Histone H1 42 138 - -
Phco4g00886 202 PANTHER HISTONE H1 27 185 - -
Phco4g00886 202 MobiDBLite consensus disorder prediction 114 143 - -
Phco4g00886 202 MobiDBLite consensus disorder prediction 114 202 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco4g00886 Phco-Chr4 6972254 6972962 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco4g00886 4 6972254 6972962 Phco4g00886 4 6972254 6972962 ECH