Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco4g00863 ATGATTTCTTCTGTGGCCTTTCAACCGTCTCTTCCCGCCGTAAACTTCTCCGGTAAAGTTCTGGCCTCGCCGTCCTGTCGCGTTAGATCCCGGCCAATAGTCGCCTTCGCCACCGCCACCGCCACTTCAACCGAGGAAGCTCGCTCTTCCTGGACGGAGAAACCACGCCCTTCCTATCTCAATTCCTCCTGCTCTTCCCTCTACGATATCCTCGGCATCCCCGCCGGTGCCTCCAGCCAGGAAATCAAGGCCGCGTACCGGCGACTGGCCAGAGTCTGCCACCCGGACGTGGCGGCGATCGACCGGAAAAACTCCTCCGCGGACGAATTCATGAAGATCCACGCCGCCTACTCCACTCTCTCGGATCCTGACAAACGCGCCAACTACGACCGGAGCCTGTTCAGGCGACAACGGCCGCTGTCTACTGCGGCGGTGTTCTCGGGCTACACGCGCCGGAACTGGGAAACGGATCAGTGCTGGTAG 483 0.6066 MISSVAFQPSLPAVNFSGKVLASPSCRVRSRPIVAFATATATSTEEARSSWTEKPRPSYLNSSCSSLYDILGIPAGASSQEIKAAYRRLARVCHPDVAAIDRKNSSADEFMKIHAAYSTLSDPDKRANYDRSLFRRQRPLSTAAVFSGYTRRNWETDQCW 160
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco4g00863 160 SUPERFAMILY Chaperone J-domain 63 136 IPR036869 -
Phco4g00863 160 CDD DnaJ 68 122 IPR001623 -
Phco4g00863 160 Pfam DnaJ domain 67 130 IPR001623 -
Phco4g00863 160 Gene3D DnaJ domain 57 152 IPR036869 -
Phco4g00863 160 PRINTS DnaJ domain signature 86 101 IPR001623 -
Phco4g00863 160 PRINTS DnaJ domain signature 105 125 IPR001623 -
Phco4g00863 160 PRINTS DnaJ domain signature 68 86 IPR001623 -
Phco4g00863 160 SMART dnaj_3 65 125 IPR001623 -
Phco4g00863 160 ProSitePatterns Nt-dnaJ domain signature. 110 129 IPR018253 -
Phco4g00863 160 ProSiteProfiles dnaJ domain profile. 66 133 IPR001623 -
Phco4g00863 160 PANTHER DNAJ DOMAIN (PROKARYOTIC HEAT SHOCK PROTEIN)-RELATED 18 140 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco4g00863 Phco-Chr4 6718755 6719237 Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco4g00863 4 6718755 6719237 Phco4g00863 4 6718755 6719237 ECH