Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco4g00845 ATGGCGAAACCTGATGTTGACCAGGAGTATCTCAAGGAAATAGAGAAGGCTCGACGTGAACTTCGTGCTCTCATCAACACCAATAAATGCGTCCCTCTCATGCTTCGCTTAGCTTGGAACGATGCTTGTACCTACGATGCAGAAAGAAGAACAGGAGGCCCCAACGGTTCTATCAGGGCTAAACAAGAGTTGAAACACGAAACAAATAAGGGATTGGAAAAAGCAGTTCAATTATGCGAGACAGTGAAGGCCAAACTAAAAAAAGTTTCATATGCAGACCTTTATCAGCTTGCTGGTGTTGTTGCAGTAGAGCTCATTGGGGGTCCATATATTGACTTTGTTCCTGGCAGAATGGACTCACATGAGTTTCCACGAGAAGGACGTCTTTTAAATGGTGAAGAAGGTAATAAAATCAGGGCACTATTGAGTAAGGATGCATCATCAAGGCTTGCCATGGATGATGCTTTGGTAAAGGATGAAAAATTCCGCTACTACATTCAACTCTATGCAAAGGATGAGGATACTTTTTTAAAAGATTATGCAATCTCACACAAGAAACTCTCTGAGTTAGGATGCAATCTGAAGAAGGTAGATGAGGCAAAAGAAGCATATGAGAAGCAAAATCAGCTCAAAGGACTTATAGGAATCAGTATAGTATCAGTTGTGGTGACTGTAGTATTAGGTTACTTTCTCAAGAGGAAGAAAAACCAATTAGAGAAATGA 723 0.408 MAKPDVDQEYLKEIEKARRELRALINTNKCVPLMLRLAWNDACTYDAERRTGGPNGSIRAKQELKHETNKGLEKAVQLCETVKAKLKKVSYADLYQLAGVVAVELIGGPYIDFVPGRMDSHEFPREGRLLNGEEGNKIRALLSKDASSRLAMDDALVKDEKFRYYIQLYAKDEDTFLKDYAISHKKLSELGCNLKKVDEAKEAYEKQNQLKGLIGISIVSVVVTVVLGYFLKRKKNQLEK 240
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco4g00845 240 PRINTS Plant ascorbate peroxidase signature 31 46 IPR002207 GO:0004601|GO:0006979|GO:0020037
Phco4g00845 240 PRINTS Plant ascorbate peroxidase signature 63 87 IPR002207 GO:0004601|GO:0006979|GO:0020037
Phco4g00845 240 PRINTS Plant ascorbate peroxidase signature 88 106 IPR002207 GO:0004601|GO:0006979|GO:0020037
Phco4g00845 240 PRINTS Plant ascorbate peroxidase signature 49 59 IPR002207 GO:0004601|GO:0006979|GO:0020037
Phco4g00845 240 PRINTS Plant ascorbate peroxidase signature 10 30 IPR002207 GO:0004601|GO:0006979|GO:0020037
Phco4g00845 240 PRINTS Plant ascorbate peroxidase signature 107 119 IPR002207 GO:0004601|GO:0006979|GO:0020037
Phco4g00845 240 FunFam Peroxidase 4 97 - -
Phco4g00845 240 PANTHER THYLAKOID LUMENAL 29 KDA PROTEIN, CHLOROPLASTIC-RELATED 147 197 IPR044831 GO:0004601|GO:0034599
Phco4g00845 240 Gene3D - 1 136 - -
Phco4g00845 240 Coils Coil 7 27 - -
Phco4g00845 240 PRINTS Haem peroxidase superfamily signature 107 119 IPR002016 GO:0004601|GO:0006979|GO:0020037
Phco4g00845 240 PRINTS Haem peroxidase superfamily signature 89 106 IPR002016 GO:0004601|GO:0006979|GO:0020037
Phco4g00845 240 PRINTS Haem peroxidase superfamily signature 31 45 IPR002016 GO:0004601|GO:0006979|GO:0020037
Phco4g00845 240 Pfam Peroxidase 18 125 IPR002016 GO:0004601|GO:0006979|GO:0020037
Phco4g00845 240 Gene3D Peroxidase, domain 2 147 185 - -
Phco4g00845 240 Coils Coil 187 207 - -
Phco4g00845 240 SUPERFAMILY Heme-dependent peroxidases 9 191 IPR010255 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco4g00845 Phco-Chr4 6520326 6522682 Tandem
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco4g00845 4 6520326 6522682 Phco4g00845 4 6520326 6522682 ECH