Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco4g00785 ATGCTTTTTCGTAATAGTCAGTGTCTGGGACATCCTGAAACGGCAACGTTTTCTGCTCTCCTTCGCGTGCACGCCGGCGTGAGATCCATTCTGCCACCGGCGATCTCACCTCCACCGGCGCTTCCGCGTTCAAATCGATTCAGCGTCGTTTATTTGCCAAATTCTGTCTATCTTTCATTCTGTAACACAGGTTCCCCACACTCAGACTTGTGTTGCAAGAGGTTGATTGCATCGGGTGAAGGGGATACTGGTGGAATAATGGACACTCACGCGGAAGATTCTGTTAGACCTGAGGAGCATTTGCCTGATGCGGATCATCATTACGACGATGGAAGCAATGGGAATATTCTATTGGAAAATGGATTGTCTGATGGCAATCAAGGTCCTGCTGATACTGACGATCAGCTTCTAGAAATGGCTATGGACCTCAGGTTTCAGAATGACTACTTGAAGTCCCAGTTTGAGGGATTTAAAAATGTAAACAGTGTACATAGTGATTCTAGTATACAGAAAGGAGTTGGTGGCTTAGAAGATACGGATTCTGACATTGTGAAAGAACTAAAGGAAAAAATACAATTGTTAAATAAAGAATTTCTGGAAGAAAAGCAAACAAGAATTGCATCAGAGGAGGCTTTGAAGCATCTTCAATCGTTATACTCAGAGGCAGAAGCAAAGGGCCAAGAGCTCTCTGAAAAGCTTGCAGAAGCTCAAACGAAGTTGGACCAAGAAACAAAAGAGCGTGATGAGAAATATTCTGAACTTGACTCCAAGTTTAATAGGCTTCATAAGCGAGCAAAACAGCGCATTCAAGAAATTCAAAAGGAAAAAGATGATCTTGAGGCCCGTTTCTCTGAGGTGAATGAAATTGCAGCTCGAGCATCATCCCAACAGTTGGCAATGCAACAAGAATTAGAGCGTACTAGGAAGCAAGCAAATGAGGCATTGAAAGCCATGGATGGTGATAGACAACAACTAAGAAGTGCAAACAACAATCTTCGAGATACCATTGAAGATTTAAGGCGTTCATTGCAACCTAAAGAGAGTGCTCTTGAAGTATTGCAACAGTCACTTGCAGAAAAGGAACAGATGTTGGAAGATATGAGAGGGTTGCTTCAGGCTGCTGAAGAAAAAAGGCAAGCTGCGCTAGTTGAGCTCTCAGCTAAGCATCAAAAGAATATAGAGAGTTTGGAGGCTCAACTTAATGATGCATTGTCTGACAGAAGTAAGGCAACTGAATCCATTTCTTCACTGCAGGTTCTAGTTGCAGAAAAAGAATCCAGAATTGCAGAGATGGAAGCAGCATCAACTGGGGAAGCAGTGCGACTCAGGGCAGCGGTGGAAAGTGTGAAAGGGGAGCTTTCTCACCTAAAAGAGGAGCATGGAAAAGAAAGGGAAAGCTGGGAAACTGCTTTGCAGACACTTAAAGCAAAACTCGAAATTGCAGAGAGCAACTGCATACGTGCAGAAGTTGAAGTAGCCAAAATAAGAAGTCAGCTGGAATCAGAGGTATCTGCACAAACGAGGATCCTCAATACGAGGGATGTAGAATTGTTGGCTGCCAAAAAAGAGATCATCTCTCTAGAAAAGGAATTTTCTTCATACAAAGTTCGTGCACATGCTCTTCTTCAAAAGAAAGATGCTGAACTAGCTGCTGCTAAAGATTCTGAACAACTCAAAGCTCTAGAGGAAACTCTGAAAGAGGTTGAAAATGAAGTATTATCAATAACAGAAGAAAGGGATAAAGTTCTTCAAGATCTTCAATCTGCTATGGCTAATCATGAGAAAGAACTTGCAGAAAGAGACACAACCCTTGAAAATGTCAAGCAACAGATAAGGAGCTTAGAAATAAAGCTTGACTCAGTTAATGCTCAGCACCTAAAAGAGAAAGAGGAATGGGGACTAAGTCTTCAAAATGTAGAAGAAACATGGAGAATCAAATGTGAGGCAATGAAGGCTGAAAATGAAGCAATTGCCACAAAAGATAAGCAAAAGGAATTGGAAGAGCTCAAACAGCGATGTAAAAAACTGAAGGAAGAGCATGCTTCATTTCATGATCTTGCGGATAGAATGATAGAGGAGAAAGACTATGAAATATCCAGACTTTTAGATGAAAATAAGAATCTTCGTCAGTCTCTTCAATCAAGACCACTAGTCGATCAAAATGATTATTACACAACAGCCTTGCATAAATTGGATTCAACTAATTTAAGCCCCTCAGCTGCAGAACAGCAAATTCTGCTTTTGGCTAGACAACAAGCGCAGAGAGAGGAAGAGTTAGCACAGTCACAGCGTCATATTTTAGCTCTTCAAGAAGAAATTGAGGAGCTTGAACGTGAGAATCGTCTCCACAACCAACAGGAGGCAATGTTAAAGACTGAGTTTCGCAACATGGAAAGATCAAAGAAAAGGGAAGGTGTGGATATGACATATTTGAAGAATGTTATCTTAAAGCTGCTTGAGACTGGTGAAGTTGAGGTATTGCTTCCAGTTATTGGAATGCTGCTTCAGTTTAGTCCAGAAGAGATTCAGAAGTGTCAACAGGCATATCACAAATCAACAGAAGTTCCACCAACTCCTGCAAGTGATGCTTCAGGATCTGCCCTATCACTTTTCTCAAGATTCTCATTTTCTTAA 2634 0.4142 MLFRNSQCLGHPETATFSALLRVHAGVRSILPPAISPPPALPRSNRFSVVYLPNSVYLSFCNTGSPHSDLCCKRLIASGEGDTGGIMDTHAEDSVRPEEHLPDADHHYDDGSNGNILLENGLSDGNQGPADTDDQLLEMAMDLRFQNDYLKSQFEGFKNVNSVHSDSSIQKGVGGLEDTDSDIVKELKEKIQLLNKEFLEEKQTRIASEEALKHLQSLYSEAEAKGQELSEKLAEAQTKLDQETKERDEKYSELDSKFNRLHKRAKQRIQEIQKEKDDLEARFSEVNEIAARASSQQLAMQQELERTRKQANEALKAMDGDRQQLRSANNNLRDTIEDLRRSLQPKESALEVLQQSLAEKEQMLEDMRGLLQAAEEKRQAALVELSAKHQKNIESLEAQLNDALSDRSKATESISSLQVLVAEKESRIAEMEAASTGEAVRLRAAVESVKGELSHLKEEHGKERESWETALQTLKAKLEIAESNCIRAEVEVAKIRSQLESEVSAQTRILNTRDVELLAAKKEIISLEKEFSSYKVRAHALLQKKDAELAAAKDSEQLKALEETLKEVENEVLSITEERDKVLQDLQSAMANHEKELAERDTTLENVKQQIRSLEIKLDSVNAQHLKEKEEWGLSLQNVEETWRIKCEAMKAENEAIATKDKQKELEELKQRCKKLKEEHASFHDLADRMIEEKDYEISRLLDENKNLRQSLQSRPLVDQNDYYTTALHKLDSTNLSPSAAEQQILLLARQQAQREEELAQSQRHILALQEEIEELERENRLHNQQEAMLKTEFRNMERSKKREGVDMTYLKNVILKLLETGEVEVLLPVIGMLLQFSPEEIQKCQQAYHKSTEVPPTPASDASGSALSLFSRFSFS 877
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco4g00785 877 Coils Coil 212 253 - -
Phco4g00785 877 SMART 1grip 804 848 IPR000237 -
Phco4g00785 877 Pfam GRIP domain 805 844 IPR000237 -
Phco4g00785 877 Coils Coil 649 686 - -
Phco4g00785 877 Coils Coil 350 434 - -
Phco4g00785 877 Coils Coil 301 342 - -
Phco4g00785 877 Coils Coil 262 289 - -
Phco4g00785 877 PANTHER SYNAPTONEMAL COMPLEX PROTEIN-RELATED 143 861 - -
Phco4g00785 877 ProSiteProfiles GRIP domain profile. 801 848 IPR000237 -
Phco4g00785 877 Coils Coil 184 204 - -
Phco4g00785 877 Coils Coil 752 793 - -
Phco4g00785 877 Coils Coil 691 711 - -
Phco4g00785 877 Coils Coil 544 631 - -
Phco4g00785 877 Coils Coil 439 498 - -
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco4g00785 4 6050640 6061771 Phco4g00785 4 6050640 6061771 ECH