Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco4g00759 ATGATGGCCAGCATAAACCTTTTGCCGGAGACAGTGCGTAGCTCACTTCGTTCTGGCATTTTCCTGTTCGACTTCACGCGCGTCGTGGAGGAACTGGTTTTCAATAGCCTCGATGCTCGTGCCACAAAGGTATCAGTGTTTGTTAGTATTGGGAAATGCTGTTTGAAAGTAGTTGATGATGGTTTCGCTATATCTTTTATGGTTTCGGTAAATGTGTTTGTAGGAAGTGGAATTACTCGAGATGGACTTGAGTTGGTGGGAGAAAGATATGCAACATCAAAATTTCTTAATTTGGTTGACCTCAATGTTGCGAGTGAGAATTTCGGTTTCCGTGGGGAGGCTTTGGCTTCCATTTCTGATGTCTCTGTGCTGGAAATTGTGACAAGAACACATGGAAGGCCAAATGGATATCAAAAAGTTTTGAAGGGGTGCAAGTGTTTATATCTCGGCATTGATGATGATAGAAAGGAAGTGGGTACCACAGTTGTTGTCCGTGACTTATTTTACAATCAACCAGTTCGGAGAAAATGCATACAGTCCAGTCCCAATAAGGTACTGCAATCAATCAAGAAATGTGTAATGCGGCTTGCACTTGTGCGTCCAAATATTTCCTTCAAAGTTGTTGATATTGAAAGAGAGGATAAACTGTTCTGCACACATTCTGCTTCTTCTCCTCTGTCACTTGTAACCAGTGGCTTTGGGATTCTTTCTGGGTCATCTCCCCTAAATTTTGATGCATTTTTGCAGGTCCTGCAGTATGTCTGCCCAATTCATAAGCTTCTGAATCAACTGGCTATCAGGTTTGAACATCTGAACTCATGGAATACCGATAATGAGTTCCGAATCAAGAAGAGAAGCAGGTGTCAGGCGGGTCCAGCTTATCTCTTGAATTTAAGTTGCCCCCGATCTATGTATGATTTGGCCTTTGAGCCATCAAAAACGTATGTTAAATTCAAGATTCTTGCAGTAGAGCCCTCCAATCAAGCTGCATACATGGTAGAAGATCAACAAGAGAAAGCATATGTCAACATCATTTCAGACGTATCAGATATATCAAAGTTTAGAAACCAAAATCGTAAGGATTGCCTAGATCTATTCTTTTCTACTTCAGACAAGCTAATTGAAGATGACTATCGTCAATCTAACAGGGAAAATGTTAGAACCTCCATTGATTACATGGAGGCCGCGATGCTCAAAGAGAAACAAAGTATAGGGGACTCTCTTTTTCAGACTGGTTATTCTGGCAACTTATTGGATGATGATTCACATGCCAAGTGCATATCCAATGTGACAAGAAGGCCAAACAGTTTGCTGATGCGTGATAGCAGCAGTTCATTGAAAGGAGATAACCTTTTTTATGGTGAAATACCAGCTATAGAAAGTTTAAATGATTGTGTACCTTTTCATGCACCGAGTTCTTCGCATGGAAGAAAATTCCATAAAGAAGCTGATGTGAACAGTGAAGCATTTCAAGATGATTTACATTTTAACTGCAATGGGTACAGTTGTGATGTAAATATTAATGGGGATTTGCAGAAAGCTTTTCTAAAGGGATGCTCTACTCTAGGAAGTATCCTGCATAAGAAAGATTTCTTTGTAAATGATGGATATGAAATCCAAACTGATAGCTTTTGTAGCAAGCGGAATACAGGGGAGGATTGTAGAAGTGGTAAGGATTTAAATGATGTACCTTTTGATGAACCAAGTTCTTCACATGGAAGAAAATTCCATAAAGAAGCTGATGTGATCAGTGAGTCATTTCAAGATGATTTACACTATAGCTACGATGGGTATAGTTATGATGTAGATATTAATGGGGATTTGCAGAAACCTTTTCTAAAGGGATGCTCTACACTAGGAAGTATCCTGCCTAAGAAAGATATCTCTGTAAATGATAAATATGAACTCCAAACTGATAGCAGCTTTTGTAGCAAGAAGAATACAGGGGAGGATTATAGAAGTGGTAAGGATTTATATGTCCATCCCTATCCGGAAGTTAAAAAAAAATTAAAGATGTCTAACAATTCCGATTTTCTTGAAAGAGAATTGGCTGAAGAAAACTGTCTCCCTTCAGATTTATGCGACTCAGCATCAAGAATAGGAAGCTCTGGGTCAGATGATCTGTCATTCAATTTTGAATGGCATCCTTTCTACCCAAAACCCTCATCTCAAGCACATGGACTGGGTTTTTATTGTACAACTGATATTAAAGATGATCTTGGAGGAGTATCTAGATGCTTTAAATGGGCCCATCATAAAAAACGTTTTGATGAAAGAGAAAATGAGTGCAATTTCAGCTACAATATGTCATGGAATACCAACCACCATCACTCTGCATCAAGTTATGCAAATATTGGATTTAATGTTGATGTTGCTGGTGATTCTGGTGAAATATTCAACAAACTAGTTGACTGCCCTGATTTCAGTGACATATATTCTACAAAAAGGTCAGATATGTTAAACAAGGAGCTAGACTGGCTGTTGCCAAAGTCACGTGTTAAAAGCTGCAAGAGGCCTAACAAGAACAAAGGCAAAACAGATCAATTTAGAAATTCAATTTTGGAGGAAAATCATGAAAGATCTAGAAGAAGCATTTCAGCTCCTCCTTTTTATAGACGCAAAAGGAGGTTTTTCTCTTTAAATCATCCTTCAGAAATAAAAGCCAAAAGACAGATTGACCGAGTGGATAACCCTGCTTTCAATCATGGAGAAGCTAGTAATTCTAAATATCATCAACAGCCTCCTGTTGCTCATCACCAAAGCACTAAAGATCTCTTATTACAAGAATTCAAAATCAACGTGAAACAAACATCAGAGGTTCTGGGTGCTATGCAGGTTAATGACATAACAGAGATTGAAGAACTTGAGAGTTTCAACATTCAAAACAGTGCTCCAATTGGGGAATTGTGCTCTAAGGATGTGCAAGATTCCATAGATTTCGGGACTAAGTGGAGGAATTGGTCACCTAATATTACAAAGAATGATAAACCGGCTAATATTGAATGTCGAAACAATATACTTGACATTTCTTCTGGATTCTTGCATCTTGCTGGAGATTCATTGATTCCTGAAACTATCAGTAAGAAATGTCTTGAGGATTCTAAAATTTTGCATCAGGTGGATAAAAAATTCATTCCAGTTGTGGCTGGCAGAACCCTTGCTGTTATTGATCAGCACGCAGCAGATGAAAGAATCAGACTGGAAGACTTGCGTCAAAAGGTATTGTCAGGAGAAGCAAAAACAGTAACCTATCTACATTCTGAACTGGAACTGGTACTGCCAGAGATTGGTTATCAACTACTTCATAGTTATAGCGAACAGATTAAAGATTGGGGCTGGATCTGCAACATTCATGCTAAAAATTCCGAGTCCTTTAGAAGTCAGACATTTTATGCTTTTCTAACTTCAAATACATCATTACCTTTCCAGCTTGCTGACACTGATGGATCGTCAACAATGCCACCCTCTGTCATACGAGTGTTAAATTCGAAGGCATGCAGAGGTGCAATTATGTTTGGGGATTCATTGCTACCATCAGAATGTTCCCTTCTAGTTGAAGAGCTAAAGCATACATCGCTTTGTTTCCAATGTGCTCATGGGCGACCAACAACTGTTCCTCTAGTTAACTTGGAGGTACTGCATAATCAGATAGCCAAGCTTCGACTGATGAACGAGTCTTCAAGTGACGAGTGGCATGGATTACATAAACATAAAGTATGCGTTGAACGTGTAGTACAACGTTTAAATCCTGCTAGTGGAACTTGA 3765 0.3896 MMASINLLPETVRSSLRSGIFLFDFTRVVEELVFNSLDARATKVSVFVSIGKCCLKVVDDGFAISFMVSVNVFVGSGITRDGLELVGERYATSKFLNLVDLNVASENFGFRGEALASISDVSVLEIVTRTHGRPNGYQKVLKGCKCLYLGIDDDRKEVGTTVVVRDLFYNQPVRRKCIQSSPNKVLQSIKKCVMRLALVRPNISFKVVDIEREDKLFCTHSASSPLSLVTSGFGILSGSSPLNFDAFLQVLQYVCPIHKLLNQLAIRFEHLNSWNTDNEFRIKKRSRCQAGPAYLLNLSCPRSMYDLAFEPSKTYVKFKILAVEPSNQAAYMVEDQQEKAYVNIISDVSDISKFRNQNRKDCLDLFFSTSDKLIEDDYRQSNRENVRTSIDYMEAAMLKEKQSIGDSLFQTGYSGNLLDDDSHAKCISNVTRRPNSLLMRDSSSSLKGDNLFYGEIPAIESLNDCVPFHAPSSSHGRKFHKEADVNSEAFQDDLHFNCNGYSCDVNINGDLQKAFLKGCSTLGSILHKKDFFVNDGYEIQTDSFCSKRNTGEDCRSGKDLNDVPFDEPSSSHGRKFHKEADVISESFQDDLHYSYDGYSYDVDINGDLQKPFLKGCSTLGSILPKKDISVNDKYELQTDSSFCSKKNTGEDYRSGKDLYVHPYPEVKKKLKMSNNSDFLERELAEENCLPSDLCDSASRIGSSGSDDLSFNFEWHPFYPKPSSQAHGLGFYCTTDIKDDLGGVSRCFKWAHHKKRFDERENECNFSYNMSWNTNHHHSASSYANIGFNVDVAGDSGEIFNKLVDCPDFSDIYSTKRSDMLNKELDWLLPKSRVKSCKRPNKNKGKTDQFRNSILEENHERSRRSISAPPFYRRKRRFFSLNHPSEIKAKRQIDRVDNPAFNHGEASNSKYHQQPPVAHHQSTKDLLLQEFKINVKQTSEVLGAMQVNDITEIEELESFNIQNSAPIGELCSKDVQDSIDFGTKWRNWSPNITKNDKPANIECRNNILDISSGFLHLAGDSLIPETISKKCLEDSKILHQVDKKFIPVVAGRTLAVIDQHAADERIRLEDLRQKVLSGEAKTVTYLHSELELVLPEIGYQLLHSYSEQIKDWGWICNIHAKNSESFRSQTFYAFLTSNTSLPFQLADTDGSSTMPPSVIRVLNSKACRGAIMFGDSLLPSECSLLVEELKHTSLCFQCAHGRPTTVPLVNLEVLHNQIAKLRLMNESSSDEWHGLHKHKVCVERVVQRLNPASGT 1254
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco4g00759 1254 MobiDBLite consensus disorder prediction 901 918 - -
Phco4g00759 1254 Pfam MutL C terminal dimerisation domain 1036 1176 IPR014790 GO:0005524|GO:0006298
Phco4g00759 1254 SUPERFAMILY DNA mismatch repair protein MutL 1035 1207 IPR037198 -
Phco4g00759 1254 Gene3D - 3 224 IPR036890 -
Phco4g00759 1254 SMART MutL_C_2 1036 1176 IPR014790 GO:0005524|GO:0006298
Phco4g00759 1254 ProSitePatterns DNA mismatch repair proteins mutL / hexB / PMS1 signature. 109 115 IPR014762 -
Phco4g00759 1254 MobiDBLite consensus disorder prediction 899 918 - -
Phco4g00759 1254 Gene3D - 1039 1207 IPR042120 -
Phco4g00759 1254 PANTHER DNA MISMATCH REPAIR PROTEIN MLH, PMS, MUTL 2 1211 IPR038973 GO:0006298|GO:0016887|GO:0032300|GO:0140664
Phco4g00759 1254 SUPERFAMILY ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 24 218 IPR036890 -
Phco4g00759 1254 Gene3D - 1080 1171 IPR042121 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco4g00759 Phco-Chr4 5850622 5860305 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco4g00759 4 5850622 5860305 Phco4g00759 4 5850622 5860305 ECH