Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco4g00720 ATGGTTCCTAAACCCATCACAGTGACAGCAGGAGCACCACCGGTGTCTTCTCCACCCAACCCTCTCATGAAAAACGCAGTATCAACCGTTAAAACAGAAGAAAAACCCCAAACCACCACCCTTCCCCCACTCTCAACCACCACTCCAAAAACCAACCCTGCTCCAACCGTCAAAACAACGCCGCAGCAACGCCTGGAACCAAAAAGAAAAACGAATTCATCGCCTCCAGCGCTAATGCTCAACGCGTTGGACAGCATCATCAACAACTTCATAGACCCTCCGCTGAAACCCTCCGTAGACCCCAGACACGTCCTGTCGCAAAACTTCGCCCCCGTCAATGAGCTCCCTCCCACCGAGTGCCAAGTCATTGAGGGCTCCCTCCCGCCCTGCCTCGACGGCGCGTACATCCGAAACGGCCCTAACCCTCAGTTCCTCCCTCGTGGACCCTACCACCTCTTCGACGGCGACGGCATGCTCCACGCGCTCCGCATCTTCCAAGGCAAACCCACCCTATGTAGCCGCTACGTCAAAACCTACAAATACACAATGGAAAACGACGCCGGTTTCCCTCTCATCCCCAACGTCTTCTCTGGCTTCAACTCCCTAGTTGCCTCCGCGGCGCGTGGCTCTCTAACCGCGGCCAGGATCGTCACGGGACAGTTCAATCCGTCTAATGGCATTGGGTTGGCCAACACCAGCGTAGCCTTCTTCGCTAACCGTCTCTTCGCGCTAGGCGAATCCGACCTCCCCTACGCCGTCTATGTTACCCCTAATGGCGAGGTCGAAACAATCGGCCGTTACGACTTCGACGGCAAACTTACGGTCAGCATGACGGCGCATCCGAAGATAGACCCCGACACAGGGGAATGCTTCGCCTTCCGTTACGGCCCTGTTCCCCCGTTCCTAACCTACTTCCGTTTTGACCCTAACGGGAACAAACAAGACGACGTGCCTATCTTCTCCGTGACTTCACCTTCGTTTCTCCACGACTTCGCCATCACCAAGAATTATGCAGTCTTCTGCGATATTCAGCTCGGAATGAACCCTCTCGGCATGATCGCCGGTGGCTCCCCCATCGGCTCCATCGCTTCCAAGGTCCCAAGGATTGGAGTCCTTCCTCGTGATGCTAAGGATGAATCCAAGATGAAGTGGTTCGAGGTGCCGGGGTTTAACTTCGTTCACGCGATAAACGCGTGGGAGGAGGATGGGGGAAGAACTGTGGTGCTGGTGGCGCCGAATATTCTGTCGTTGGAGCACGCAATGGAGAGAGTGGAGCTGGTTCACGCGATGGTGGAGAAGGTGAGGATCGATCTGGAGACGGGGATTGTGACGCGGCAACCGGTGTCGGCGCGGAACCTTGATTTCGCGGTTATAAACCCAGCATTCGTTGGGAAGAAGAATAGGTTCGTTTACGCGGCGGTGGGAGACCCGATGCCGAAGATCTCGGGGGTGGTGAAGCTGGACGTGTCGAAGGTGGAGGAGCGGGGGGACTGCACGGTGGGATGCAGGATGTACGGCGAGGGATGCTACGGCGGGGAACCGTTCTTCGTGGCGAAGGAGGAAGGGAGCGAGGAGGACGATGGGTACTTGGTGACCTACGTGCACGACGAGAGGAAGGGAGAGTCGAAGTTCTTGGTGATGGACACGAAGTCGCCGGAGCTGGACGTGGTGGCGGTGGTGAGGCTTCCACGGCGGGTTCCGTACGGTTTTCATGGGTTTTTTGTGAAGGAAAGTGAGCTTAGGAAGGCGGTGTCGTTGTGA 1761 0.5673 MVPKPITVTAGAPPVSSPPNPLMKNAVSTVKTEEKPQTTTLPPLSTTTPKTNPAPTVKTTPQQRLEPKRKTNSSPPALMLNALDSIINNFIDPPLKPSVDPRHVLSQNFAPVNELPPTECQVIEGSLPPCLDGAYIRNGPNPQFLPRGPYHLFDGDGMLHALRIFQGKPTLCSRYVKTYKYTMENDAGFPLIPNVFSGFNSLVASAARGSLTAARIVTGQFNPSNGIGLANTSVAFFANRLFALGESDLPYAVYVTPNGEVETIGRYDFDGKLTVSMTAHPKIDPDTGECFAFRYGPVPPFLTYFRFDPNGNKQDDVPIFSVTSPSFLHDFAITKNYAVFCDIQLGMNPLGMIAGGSPIGSIASKVPRIGVLPRDAKDESKMKWFEVPGFNFVHAINAWEEDGGRTVVLVAPNILSLEHAMERVELVHAMVEKVRIDLETGIVTRQPVSARNLDFAVINPAFVGKKNRFVYAAVGDPMPKISGVVKLDVSKVEERGDCTVGCRMYGEGCYGGEPFFVAKEEGSEEDDGYLVTYVHDERKGESKFLVMDTKSPELDVVAVVRLPRRVPYGFHGFFVKESELRKAVSL 586
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco4g00720 586 MobiDBLite consensus disorder prediction 21 76 - -
Phco4g00720 586 MobiDBLite consensus disorder prediction 1 76 - -
Phco4g00720 586 Pfam Retinal pigment epithelial membrane protein 111 576 IPR004294 GO:0016702
Phco4g00720 586 PANTHER BETA-CAROTENE DIOXYGENASE 112 576 IPR004294 GO:0016702
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco4g00720 Phco-Chr4 5502547 5504565 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco4g00720 4 5502547 5504565 Phco4g00720 4 5502547 5504565 ECH