Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco4g00707 ATGCCAGGAGATCGGGTCGGGTCGATTCGAGAAAATCCAACCGTCCATTCTGCTTTGCACTATCTCATCAATCTTCTATCCTCTTTTGCCGCTTCCTTCCGATTCCGCAACCGTCCTTCGAATTCCGGCCACCGGAGTTCTCTCTTGGGTTTCCTTGACACCATGACTTTCTCCGAGGACGAGGACGAGACTCTGGCACAATTTCTGGAATCAGAGGTTCTCTCGGAGGTCTCTGACAAGGAAGAGGAAACTGGGGAGGAACGACAGACAAAGAGAAAGCGGGCAGAGGAGGATGAGAGTACTAAAGAAAAACCAAGTTCTGATTCATCACCTGCACAGAAGAGCATTGTTGTCAATGATACGGTGGTGCTGAGAAGGATTGAGACTGGTTGTTTCAGCAAAGTTCCACCCGAGCTTTTCCATCATATCCTTAAATTTCTGTCTTCTGAGGACCTTGTTTCTTGTTCCTTAGTCTGTCGATTTCTAAACTGTGCTGCATCGGATGAGGCATTGTGGCGTCGTCTGTACTGTATGCGATGGGGCCTTCTTCCCCCTACACGGAAGTTAAGGGAATGCCCATGGAAAAAGTTATATATTCAGCGTGATGGAGAGGACATGGTTGAACTTGTTAGGAACTGCCAAAATGAGTTTAAGGAGTACTACATTCAAATGCAAGCAGCTAAGCGAAGTCAAGCTCCTCTTCCTTCCCAGTTGAAGGACGATAGGATAATTCTTGACAAAACATTAGCTGATCAAGTGGCATCATGGAAAAGCAGCAGGGGCTTAAGTGATACAGTGGTGACTGATCATACTTGTTCTGGGGAAACATGCTCTTACTACCAAATTGGAGATGTATTTATTTGTGAGAAGACTGGACAAGTTCATGTTTGTGATGATACATGTAGAGAAGTAATTATGGATCCCACAAACGAGCTTTTGGTATGTACAATATCAGGGCACTGTTTTGATAGATTATTGTCACCTTCCGAAATGGAGCCTGATACTGAGCAGCAGCAAGGTGCTGCGACTGATGAGGCAGAACCGTTTATGGGATCTGGCCGTTTTGCACGAGCTTATTTGCTGGGGTACAATTGTGCTGATGAAAAGGAGCTTGAAGCTACTTTGAGTTTCTATTGGCAGAAGAATACTTGCTTAGGTTGTCTTTTGATATTGCAGGGGCTTGATTGCATGCTTAGACGCGTCCCTGACGCGTTATCCACCCTTCTTTTGGCCATCTATAAAACACATTCTCCTCTTTCTATTCACAATAATAATAATAATAATACTTATTATTATAAATACCTATTTCTCACCCTCTTTCTTCCTTTCGAATTTCTCAATTTCTCTCTCGCCTTTCTGCAAAATCTAAATCTGTGA 1377 0.4379 MPGDRVGSIRENPTVHSALHYLINLLSSFAASFRFRNRPSNSGHRSSLLGFLDTMTFSEDEDETLAQFLESEVLSEVSDKEEETGEERQTKRKRAEEDESTKEKPSSDSSPAQKSIVVNDTVVLRRIETGCFSKVPPELFHHILKFLSSEDLVSCSLVCRFLNCAASDEALWRRLYCMRWGLLPPTRKLRECPWKKLYIQRDGEDMVELVRNCQNEFKEYYIQMQAAKRSQAPLPSQLKDDRIILDKTLADQVASWKSSRGLSDTVVTDHTCSGETCSYYQIGDVFICEKTGQVHVCDDTCREVIMDPTNELLVCTISGHCFDRLLSPSEMEPDTEQQQGAATDEAEPFMGSGRFARAYLLGYNCADEKELEATLSFYWQKNTCLGCLLILQGLDCMLRRVPDALSTLLLAIYKTHSPLSIHNNNNNNTYYYKYLFLTLFLPFEFLNFSLAFLQNLNL 458
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco4g00707 458 ProSiteProfiles F-box domain profile. 129 175 IPR001810 GO:0005515
Phco4g00707 458 Pfam UL92 family 276 342 IPR004289 -
Phco4g00707 458 Pfam F-box-like 134 177 IPR001810 GO:0005515
Phco4g00707 458 FunFam F-box family protein-like 120 206 - -
Phco4g00707 458 CDD F-box_AtSKIP31-like 132 177 - -
Phco4g00707 458 SUPERFAMILY F-box domain 129 427 IPR036047 GO:0005515
Phco4g00707 458 MobiDBLite consensus disorder prediction 81 105 - -
Phco4g00707 458 Gene3D - 118 206 - -
Phco4g00707 458 SMART fbox_2 135 175 IPR001810 GO:0005515
Phco4g00707 458 PANTHER F-BOX ONLY PROTEIN 3 58 376 - -
Phco4g00707 458 MobiDBLite consensus disorder prediction 75 113 - -
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco4g00707 4 5407134 5412732 Phco4g00707 4 5407134 5412732 ECH