Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco4g00702 ATGGAACTAAGCACCATCTTATGTTTGTGTGCTTCCTTTCTCTTCATTTTTCTCTTCAGGACACTCATCAAACAGTTTCTCTCCAAACGCCCTCACTTCCCACTCCCACCTGGCACCATGGGTTGGCCTTATATAGGAGAAACCTTTCAAATGTATTCCCAAGACCCAAATGTCTTCTTTGCCTCCAAAATTAAAAGGTATGGCTCTATGTTCAAGTCCCACATTCTAGGATGTCCCTGTGTGATGATTTCCAGCCCCGAGGCTGCCAAGTTTGTGCTCAACAAAGCTCAACTCTTCAAGCCAACATTCCCAGCTAGCAAAGAGAGGATGTTGGGAAAACAAGCTATCTTCTTTAACCAAGGAGAGTACCATGCTAACTTGAGAAGGCTTGTTCTTCGCACCTTCATGCCTGAAGCCATCAAAAACATCGTACCTGACATTGAATCCATTGCTCAAGATTGCTTAAAATCCTGGGAGGGCCGTTTGATCACCACTTTCCTTGAAATGAAAACGTTCACCTTCAACGTTGCTCTGCTTTCAATTTTCGGGAAAGAAGAGATTCTGTACAGAGATGCTCTGAAACGGTGTTACTACACTCTGGAGCAAGGGTACAACTCAATGCCCATTAACGTTCCGGGGACACTGTTCCACAAGGCAATGAAAGCGAGGAAGGAGCTTGCGCAGATCTTGGCCCAAATAATCTCTAGCAGGAGGCAGAGGAAACAGGATTACAAGGACTTATTGGGTTCATTCATGGGAGAGAAAGCAGGGCTCACCGACGAGCAGATAGCAGATAATGTAATTGGAGTCATTTTTGCAGCTCGTGATACCACTGCCAGTGTGCTGACGTGGATTGTCAAGTACCTTGGTGAAAACCCCAGTGTCCTAGAAGCTGTTACTGAAGAGCAAGAGTGCATATTGAAGACCAAGGAAGAAAGTGGAGAGGATAAGGGTCTGAATTGGGAAGATACCAAAAAGATGCCGATAACTTCAAGGGTTATTCAGGAAACTCTAAGAGTTGCTTCAATTTTGTCTTTTACTTTCAGAGAAGCAGTAGAGGATGTTGAATATCAAGGATATCTTATACCAAAAGGGTGGAAAGTGCTACCTCTATTTAGGAACATACACCACAGTCCAGATAACTTCAAGGAACCAGAAAAATTTGATCCCTCAAGATTTGAGGCTGCACCAAAACCCAATACTTTTATGCCATTTGGCAGTGGGATCCACGCTTGTCCAGGGAATGAATTAGCCAAGTTGGAGATTTTGATCCTCCTACATCATCTTACCACAAAGTTCAGGTGGTCTGTTGTGGGTGCAAAGAATGGGATTCAATATGGCCCTTTTGCTCTTCCCCAAAATGGTTTACCCATCACACTATATCCCAAGAAGTAG 1395 0.4401 MELSTILCLCASFLFIFLFRTLIKQFLSKRPHFPLPPGTMGWPYIGETFQMYSQDPNVFFASKIKRYGSMFKSHILGCPCVMISSPEAAKFVLNKAQLFKPTFPASKERMLGKQAIFFNQGEYHANLRRLVLRTFMPEAIKNIVPDIESIAQDCLKSWEGRLITTFLEMKTFTFNVALLSIFGKEEILYRDALKRCYYTLEQGYNSMPINVPGTLFHKAMKARKELAQILAQIISSRRQRKQDYKDLLGSFMGEKAGLTDEQIADNVIGVIFAARDTTASVLTWIVKYLGENPSVLEAVTEEQECILKTKEESGEDKGLNWEDTKKMPITSRVIQETLRVASILSFTFREAVEDVEYQGYLIPKGWKVLPLFRNIHHSPDNFKEPEKFDPSRFEAAPKPNTFMPFGSGIHACPGNELAKLEILILLHHLTTKFRWSVVGAKNGIQYGPFALPQNGLPITLYPKK 464
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco4g00702 464 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 405 414 IPR017972 GO:0005506|GO:0016705
Phco4g00702 464 FunFam Abscisic acid 8 25 462 - -
Phco4g00702 464 Gene3D Cytochrome P450 27 462 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Phco4g00702 464 Pfam Cytochrome P450 36 438 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Phco4g00702 464 PRINTS E-class P450 group I signature 412 435 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Phco4g00702 464 PRINTS E-class P450 group I signature 331 349 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Phco4g00702 464 PRINTS E-class P450 group I signature 262 279 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Phco4g00702 464 PRINTS E-class P450 group I signature 402 412 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Phco4g00702 464 PRINTS E-class P450 group I signature 371 395 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Phco4g00702 464 PRINTS E-class P450 group I signature 282 308 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Phco4g00702 464 PRINTS E-class P450 group I signature 64 83 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Phco4g00702 464 SUPERFAMILY Cytochrome P450 30 462 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Phco4g00702 464 PRINTS P450 superfamily signature 403 412 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Phco4g00702 464 PRINTS P450 superfamily signature 332 343 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Phco4g00702 464 PRINTS P450 superfamily signature 412 423 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Phco4g00702 464 PRINTS P450 superfamily signature 273 290 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Phco4g00702 464 CDD CYP90-like 64 462 - -
Phco4g00702 464 PANTHER CYTOCHROME P450 26 33 440 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco4g00702 Phco-Chr4 5345847 5348164 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco4g00702 4 5345847 5348164 Phco4g00702 4 5345847 5348164 ECH
Phco4g00702 4 5345847 5348164 Phco8g00231 8 2193984 2196179 PCT