Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco4g00701 ATGAGTACAGTAGAAGGCAAGTCTCTCCTTCTTCGACACCGGGTTGCTCCTATCGACGCCGTGTGTGTTTCCACTCGTCTTCTTCTTCTTCTTCTTCTTCTTCTTAAATCTCTCTTCTTCTTGGTCTATAATTCTCAGATGGAGCAGCTGAAGACGCTGGGTAGAGAACTTGCAATGGGGTCGCACGGGCAGTCGAAGGAGTTTCTGGACCTCATCAAGTCCATCGGCGAGGCCCGATCCAAGGCCGAGGAGGACCGCATCGTCCTCCGCGAGATCGAAACCCTAAAGCGACGCATCAACGACGCCGACACGCCCAAGCGCAAGATGAAGGAGTACATCATCCGCCTCCTCTACGTTGAGATGTTAGGCCACGACGCCTCCTTCGGCTACATTCACGCCGTCAAGATGACACACGACGACGCCCTCCTCCTCAAGCGCACCGGCTACCTCGCTGTCACGCTCTTCCTCAGCGACGATCACGACCTCATCATCCTCATCGTTAACACCATCCAGAAGGATCTCGCCTCCGATAACTACCTCATCGTCTGCGCCGCCCTCAACGCCGTCTGCCGCCTCATCAACGAGGAGACCATTCCCGCCGTCCTCCCCCGCGTCGTGGACCTCCTTAACCACTCCAAGGACGCTGTCAGGAAGAAGGCCGTTATGGCGCTCCATCGCTTCTACCAGAAATCTCCCTCCTCCGTCTCCCACCTGTTGTCCAATTTTCGCAAGCGCTTGTGCGATAACGATCCCGGAGTCATGGGCGCTTCTCTTTGCCCTCTCTTTAATCTCGTCTCCGACGATGCTAATTCTTACAAGGATCTCGTCGTTAGCTTCGTCAACATTCTTAAACAGGTTGCAGAACACCGGTTGCCCAAGACTTATGATTATCACCAAATGCCTGCACCCTTCATTCAGATTAAGATGCTGAAAATTCTGGCATTGTTGGGAAGTGGTGACAAGCAGGCTAGTGGACACATGTACACCGTGCTTGGTGATATAATTAGGAAGAGTGATTCTATGACCAACATAGGGAATGCTGTTCTCTATGAGTGCATATGCTGTGTTGCTTCTATATATCCCAACTCTAAGTTATTAGAGGCTGCAGCGGATGTGATTGCTAAATTTTTAAAGAGTGACAGTCATAATCTCAAGTACATGGGCATTGATGCCCTTGGTCGGTTGATAAAGTTAAGTCCACATATTGCAGAACAACACCAACTGGCCGTCATTGACTGCTTAGAGGACCCTGATGATAGTCTGAAACGAAAAACTTTCGAACTGTTATACAAAATGACCAAGTCCTCCAATGTGGAAGTGATTGTTGACAGAATGATTGATTACATGATTAGCATAAGTGATGACCACTATAAAACCTATATAGCATCTCGATGTGTGGAACTTGCTGAGCAATTTGCGCCAAGTAATCATTGGTTTATACAGACCATGAATAAAGTTTTTGAGCATGCTGGAGATCTTGTTAATATTAAGGTGGCAGATAATTTAATGCGGTTGATTGCTGAAGGATTTGGGGAGGACGATGATGCTGCAGACAGTCAATTGAGATCATCTGCTGTCGAATCATATTTGCGCATTATTGGAGAGCCCAAGCTTCCTTCTGTGTTTCTCCAACTCATCTGTTGGGTTCTGGGGGAATATGGAACAGCTGATGGAAAGCATTCTGCTTCATACATCAGTGGGAAGTTATGTGACATTGCAGAGGCATATTCTAATGATGAAAATGTTAAGGCTTATGCAATTTCAGCGTTGATGAAAATTTATGCGTTTGAAGTGGCAGCTAGGAGGAAAGTGGATATCCTACCTGAGTGTCAATCTTTGATTGAAGATTTATTGGCATCCAATTCTACAGATTTGCAGCAACGTGCTTATGAATTGCAAGCCCTTATAGGTCTCGGAGCACAAGCTGTTGAAACAATAATGCCAAGAGATGCAAGTTGTGAAGACATTGAGGTTGACAAGAATCTTTCTTTCCTCAATGAGTATGTTCAGCAGTCTCTAGAAAGGGGTGCTCGATCCTATATTCCCGAGGATGAGCGCACTGGGATGGGGAATATGAACAATTTCAGAAGCCAGGATCATAATGAATCTTTGCAGCATGGTCTAAGATTTGAGGCATATGAAGTTCCAAAGGCTCCAATGCAACCAAAAGCTACTCCAGTTTCATTTGCATCCTCGGCAGACATTGTTCCAGTACCTGAGGCACTTTCTTCCAGGGAAACTCACCATATTTCATCAGTGGGATCAACATCAGAGGCTGGATCGTCAGAGCTTAAGCTAAGGCTTGATGGTGTTCAGAAGAAGTGGGGTAGGCCTACTTATTCGTCTTCAGCATCATCTGCCTCTGATTCTTATTCTACATCCCAAAAGCCAACAAATGGGGCAACACAGGTGGATGGTGCTACAGCTGTTAATTCAAAAGTACGCGATAGTTATGATTCAAGGAAGACGCAGGTTGATATTACTCCAGAAAAGCAGAAGCTTGCTGCTTCATTGTTTGGTGGTTCAACTAAACCTGAGAAAAGATCATCTACAAGCCATAAGCTTCCAAAATCTAATGCTGCAGACGGAGCTCAGGGATCAAAGGCTGCTGTTGTACCCAATGAAGTAGCTGTGGAAAAAACAATTCATCAACCCCCTCCTCCTGATTTGCTTGACTTGGGTGAATCAGCTGTCACTACAGCTCCTTCCTCTGTGGATCCGTTCCAGCAATTGGAAGGACTTTATGACCCAAGCATGAATTCTGGAATAGCTGATAATGCAGGTGCTACTACAAATGCCACTGATATTATGGGATTGTATTCGGAGAGTACTGGCAGTGGTAGCTATTCTATACCTGTAAGTGGGAACAATGTAAATCTTTTATCTGAATTGTCAAATGCAGCTGTAAAAGCTACTAGTGGAGAAACAATTACGACGCCTCTGCCCCAATCTATTAAGGGTCCAAATGCTAAAGATTCTTTGGATAAGGATGCGCTAGTGAGGCAGATGGGTGTGAATCCCTCGAGTCAGAATCCTAACTTGTTCAGTGACTTGCTCGGCTAA 3063 0.459 MSTVEGKSLLLRHRVAPIDAVCVSTRLLLLLLLLLKSLFFLVYNSQMEQLKTLGRELAMGSHGQSKEFLDLIKSIGEARSKAEEDRIVLREIETLKRRINDADTPKRKMKEYIIRLLYVEMLGHDASFGYIHAVKMTHDDALLLKRTGYLAVTLFLSDDHDLIILIVNTIQKDLASDNYLIVCAALNAVCRLINEETIPAVLPRVVDLLNHSKDAVRKKAVMALHRFYQKSPSSVSHLLSNFRKRLCDNDPGVMGASLCPLFNLVSDDANSYKDLVVSFVNILKQVAEHRLPKTYDYHQMPAPFIQIKMLKILALLGSGDKQASGHMYTVLGDIIRKSDSMTNIGNAVLYECICCVASIYPNSKLLEAAADVIAKFLKSDSHNLKYMGIDALGRLIKLSPHIAEQHQLAVIDCLEDPDDSLKRKTFELLYKMTKSSNVEVIVDRMIDYMISISDDHYKTYIASRCVELAEQFAPSNHWFIQTMNKVFEHAGDLVNIKVADNLMRLIAEGFGEDDDAADSQLRSSAVESYLRIIGEPKLPSVFLQLICWVLGEYGTADGKHSASYISGKLCDIAEAYSNDENVKAYAISALMKIYAFEVAARRKVDILPECQSLIEDLLASNSTDLQQRAYELQALIGLGAQAVETIMPRDASCEDIEVDKNLSFLNEYVQQSLERGARSYIPEDERTGMGNMNNFRSQDHNESLQHGLRFEAYEVPKAPMQPKATPVSFASSADIVPVPEALSSRETHHISSVGSTSEAGSSELKLRLDGVQKKWGRPTYSSSASSASDSYSTSQKPTNGATQVDGATAVNSKVRDSYDSRKTQVDITPEKQKLAASLFGGSTKPEKRSSTSHKLPKSNAADGAQGSKAAVVPNEVAVEKTIHQPPPPDLLDLGESAVTTAPSSVDPFQQLEGLYDPSMNSGIADNAGATTNATDIMGLYSESTGSGSYSIPVSGNNVNLLSELSNAAVKATSGETITTPLPQSIKGPNAKDSLDKDALVRQMGVNPSSQNPNLFSDLLG 1020
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco4g00701 1020 SUPERFAMILY ARM repeat 82 677 IPR016024 -
Phco4g00701 1020 MobiDBLite consensus disorder prediction 776 814 - -
Phco4g00701 1020 Gene3D - 55 649 IPR011989 -
Phco4g00701 1020 PIRSF AP4_epsilon 916 1020 IPR017109 GO:0015031|GO:0030124
Phco4g00701 1020 PIRSF AP4_epsilon 740 884 IPR017109 GO:0015031|GO:0030124
Phco4g00701 1020 PIRSF AP4_epsilon 56 732 IPR017109 GO:0015031|GO:0030124
Phco4g00701 1020 Pfam Adaptin N terminal region 92 637 IPR002553 GO:0006886|GO:0016192|GO:0030117
Phco4g00701 1020 MobiDBLite consensus disorder prediction 745 762 - -
Phco4g00701 1020 PANTHER ADAPTIN, ALPHA/GAMMA/EPSILON 70 882 - -
Phco4g00701 1020 MobiDBLite consensus disorder prediction 743 868 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco4g00701 Phco-Chr4 5317724 5334426 Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco4g00701 4 5317724 5334426 Phco4g00701 4 5317724 5334426 ECH