Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco4g00687 ATGCAACAGGCGTTGTATGCGCTTGATTGTGTAGCACAAACAGCAATAACGCTTGGAGATCGCTTCTTTGTGGGTATTGATATGGGTTTGCCAAGGTTTGGGCGTCCTAAGAACGATGGTGAGTTGAGTTCGAACCTTTACGTGGCCAATTGTGGGCCCGCAGTGGGGATTTCTGATGATGACATTGCATCTGTGTTCTGCAAATTCGGAGAGCTTAAGGGAGTTTATGCAGCAGATGAGAGTGGGACACGTGTCATAGTGGCTTATGCTCAAGAGGGCTCAGCACAAGCTGCCTTAAAGGCATTACATGGACGCCCATGTCCTGAACTTGGAGGTCGATCCATGCATATCCGTTATTCTGTGCTTCAGCCAACAACACAGGATCAAGCCAGTGACTTGGTTCCTGTATCTATCACGGCATCAGAAGTGAGCATTCCAGGCCTTTACCTAATGCATGACTTCATCAGTGCTAAAGAAGAAGAGGAACTGCTTCAGGCTGTTGACTGCAGGCCTTGGAACAGTCTTGCAAAAAGAAGGGTTCAACACTATGGTTATGAGTTTCGTTATGATACTAGGAACGTTAATACAAGGCATTGCTTAGGTGAACTTCCGTCATTTGTTTCTCCAATACTTGAAAGAATTTCATCATGTCCAAGTTTCAAGACTATTAAAAATATAGTTTTGGACCAACTTACGGTAAATGAGTACCCACCTGGAGTGGGTCTGTCCCCCCATATAGACACTCACTCTGCATTTGAAGATTTAATTTTCAGCCTTTCATTATCAGGGCCCTGTATAATGGAGTTCAGACGATATGAAAATGGTGATTGGCTTCCTAAAGTTGCCTCAAGTTCTGTTGCAAAAATAGAAAATACAGAAGATCAATCAAATTTTATAAGGAGAGCTATCTATCTTCCTCCTCGGTCTTTACTACTCTTGTCTGGAGAAGCACGTTATGCATGGCATCATTACATTCCACACCACAAGATAGATAAAGTTAATGGCAGTGTCATTAGAAGGGCTTCAAGAAGGGTATCTTTTACACTTCGTAAGGTTAGAGCAGGTTTGTGCAAATGTGAATTTCCTCAGTACTGCGATTCTCAAAGATAA 1110 0.4288 MQQALYALDCVAQTAITLGDRFFVGIDMGLPRFGRPKNDGELSSNLYVANCGPAVGISDDDIASVFCKFGELKGVYAADESGTRVIVAYAQEGSAQAALKALHGRPCPELGGRSMHIRYSVLQPTTQDQASDLVPVSITASEVSIPGLYLMHDFISAKEEEELLQAVDCRPWNSLAKRRVQHYGYEFRYDTRNVNTRHCLGELPSFVSPILERISSCPSFKTIKNIVLDQLTVNEYPPGVGLSPHIDTHSAFEDLIFSLSLSGPCIMEFRRYENGDWLPKVASSSVAKIENTEDQSNFIRRAIYLPPRSLLLLSGEARYAWHHYIPHHKIDKVNGSVIRRASRRVSFTLRKVRAGLCKCEFPQYCDSQR 369
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco4g00687 369 Gene3D - 34 135 IPR012677 -
Phco4g00687 369 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 44 122 IPR000504 GO:0003723
Phco4g00687 369 FunFam ALKylated DNA repair protein AlkB homolog 141 356 - -
Phco4g00687 369 Pfam 2OG-Fe(II) oxygenase superfamily 181 350 IPR027450 -
Phco4g00687 369 SMART rrm1_1 45 118 IPR000504 GO:0003723
Phco4g00687 369 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 227 353 IPR005123 -
Phco4g00687 369 PANTHER OXYGENASE-RELATED 119 365 IPR032857 GO:0070988
Phco4g00687 369 SUPERFAMILY Clavaminate synthase-like 145 353 - -
Phco4g00687 369 SUPERFAMILY RNA-binding domain, RBD 36 125 IPR035979 GO:0003676
Phco4g00687 369 Gene3D - 138 357 IPR037151 -
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco4g00687 4 5192955 5200012 Phco4g00687 4 5192955 5200012 ECH