Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco4g00670 ATGCTCGAGGAACAACCTGTTTTGTTCAGGAGGAGCCCTTCCCGGAGGCGCTTGAGATCTAGGTTTGATACCGATGATAGGGGCTGGACCTCGCTTCATGTTTTCGCTAGGAAAGGCGATCTCAAATTGGTTAAAAAACTTCTTGACGAAGGAATGAATGTCAATGTGTCTGCATGGGGCCCTAAATCAAAAGGGGTGACCCCTCTCCATCTTGCTGCGGAAGGTGGTCACATTGGAGTGATGGATGTACTACTTGAGCGTGGTGCTGACATTGATGCCAGAACCAAGGGTGCTTGTGGCTGGACACCGCTCCACATTGCAGCCAAAGAAAGGAGGAGGGATACTGTGAAATTCTTGATAGAGAATGGAGCCTTTTTGCCACCTGATATCAATGATAGCAGATTTAACCCTCCGCTTCATTACTGTCCAGGACTAGAATGGGCCTATGAGGAGATGAAGCGTCATCGACAGCTAGACTTATCTGCGGGAGAGATGTCTTATAGCTCTGAAAGCTAA 516 0.4826 MLEEQPVLFRRSPSRRRLRSRFDTDDRGWTSLHVFARKGDLKLVKKLLDEGMNVNVSAWGPKSKGVTPLHLAAEGGHIGVMDVLLERGADIDARTKGACGWTPLHIAAKERRRDTVKFLIENGAFLPPDINDSRFNPPLHYCPGLEWAYEEMKRHRQLDLSAGEMSYSSES 171
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco4g00670 171 PRINTS Ankyrin repeat signature 28 43 IPR002110 GO:0005515
Phco4g00670 171 PRINTS Ankyrin repeat signature 80 94 IPR002110 GO:0005515
Phco4g00670 171 SMART ANK_2a 99 132 IPR002110 GO:0005515
Phco4g00670 171 SMART ANK_2a 64 93 IPR002110 GO:0005515
Phco4g00670 171 SMART ANK_2a 27 56 IPR002110 GO:0005515
Phco4g00670 171 ProSiteProfiles Ankyrin repeat region circular profile. 27 56 - -
Phco4g00670 171 Gene3D - 18 161 IPR036770 -
Phco4g00670 171 ProSiteProfiles Ankyrin repeat region circular profile. 64 96 - -
Phco4g00670 171 ProSiteProfiles Ankyrin repeat profile. 99 124 IPR002110 GO:0005515
Phco4g00670 171 PANTHER ANKYRIN REPEAT DOMAIN-CONTAINING PROTEIN 39-RELATED 25 124 - -
Phco4g00670 171 ProSiteProfiles Ankyrin repeat profile. 27 59 IPR002110 GO:0005515
Phco4g00670 171 ProSiteProfiles Ankyrin repeat profile. 64 96 IPR002110 GO:0005515
Phco4g00670 171 Pfam Ankyrin repeats (3 copies) 22 94 IPR002110 GO:0005515
Phco4g00670 171 Pfam Ankyrin repeat 99 124 IPR002110 GO:0005515
Phco4g00670 171 SUPERFAMILY Ankyrin repeat 24 142 IPR036770 -
Phco4g00670 171 ProSiteProfiles Ankyrin repeat region circular profile. 99 124 - -
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco4g00670 4 5068340 5070390 Phco4g00670 4 5068340 5070390 ECH