Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco4g00665 ATGATCGAGGAAGCACTACTAGTATGGTGTAGCAGTTACAAAGTTGGTTCACTTCAATATCCATCGTTCTTACTGTCTCCACTTCGCTATCGTCATCATCTTCATCTTCTTCTTCGGAACGCTCCATTTTCATCTTCTATAACCGCTCTCAGAAGAAAGAGGTTTTGTGAGAAGCTTGTGTTCAAAATGGCTAGTTATGAAGGACAAGCGGTTACTAGTGGCAGCGATGTTAGATCAGGGAGTATGATTTTTGAGCCTATTTTGGAAGATGGAGTGTTCCGTTTTGATTGTTCTGTGAATGATCGAGATGCAGCGAATCCCAGTATTTCTTTTGCGAATACCAGGGATAGAGACACACCTATCTCTACTCAGAAGGTTCCTTCGTATATCCCTACGTTTGAGTGTCTTCTAGAGCAGCAGGTTGTCAAACTTGAGCTGCCTGTAGGTTCCTCCCTTTATGGAACTGGAGAAGTTAGTGGAGATCTAGAGAGGACGGGCAAAAGAGTTTTCACATGGAACACAGATGCATGGGGTTATGGACCTGGAACTACATCGTTGTATCAATCACATCCATGGGTGTTAGCTGTTCTTCCCAATGGTGAGGGACTTGGAATTCTTGCTGACACTACAAGGCGCTGTGAGATTGATCTGAGGAGAGAATCAACGATACAGATTGTTGCTTCATCCTCACATCCTGTCATTACGTTTGGCCCTTTTGCTTCACCCACTGAAGTCTTGATATCCCTATCAAAAGCAATTGGAACTGTATTTATGCCCCCAAAATGGTCATTAGGCTATCATCAATGCCGTTGGAGTTATTTATCTGACCAGAGAGTTCTGGAGGTTGCAAAAACATTTCGGGAAAAGTGTATACCTTGTGATGTGATATGGATGGATATTGATTACATGGACGGTTTTCGTTGTTTCACCTTTGACAAGGAGCGTTTTCGAGATCCCTCATCTTTGGTGAAAGATCTCCATTATAGTGGTTTTAAAGCTATTTGGATGCTTGATCCTGGAATCAAGCAGGAGGAGGGTTATTTTGTATATGATAGTGGTTCTAAAAATGATGTTTGGGTCCAAAAGGCAGATGGAACTCCTTATGTTGGGGAGGTGTGGCCTGGACCATGTGTATTCCCTGACTATACACAGTCAAAAGTTCGTGCATGGTGGGCAAATTTAGTTAAAGACTTCATTTCCAATGGTGTTGATGGTATATGGAATGATATGAATGAACCAGCTATCTTTAAGGTTGCAACAAAAACAATGCCTGAGAGCAATGTTCATAGAGGAGATGGTGAACTGGGAGGTTGTCAGAATCATTCGTTCTATCATAACGTGTATGGTCTACTGATGGCAAGATCAACTTATGAAGGCATGAAACTAGCCAATGAAAAGAAGCGGCCTTTTGTTCTTACTAGAGCTGGATTTTCTGGCAGCCAAAGGTATGCTTCAACATGGACTGGAGATAATCTTTCTACCTGGGAGCATCTTCATATGAGTATATCAATGGTACTTCAGCTGGGACTTAGTGGTCAGCCACTTTCAGGTCCTGATATTGGTGGATTTGCTGGAAATGCAACACCTAGACTTTTTGGACGGTGGATGGGTGTGGGTTCCATGTTTCCCTTTTGCCGAGGTCATTCTGAAGCAGCCACCGCTGACCACGAACCCTGGTCTTTTGGGGAAGAGTGCGAAGAAGTTTGCCGATTGGCTTTGAAAAGGCGCTACCGTCTTATCCCACTTATCTACACGCTTTTTTATTTTGCTCACACAAGGGGCACTCCAGTGGCAACTCCTATTTTCTTTGCGGATCCAAAAGATCCTAGCCTGAGGAAACTTGAAAATTCGTTTTTGCTTGGTCCAGTCTTAGTGTATGCAAGCACCTTACAAAGAGAGGGGTTGGATAAGATGGAGATTACTTTGCCTAAGGGAATATGGTTGAGTTTTGATTTCAATGATGCTCATCCAGATCTGCCAGCTTTATACTTAAAAGGTGGCTCAATTATTCCTGTGGGCCTCCCTCTTCAGCATGTTGGAGAAGCTAATCCGTCTGATGACTTGACCCTTCTTGTGGCCTTAGATGAACATGGGAAAGCTGAAGGTGTTCTGTTTGAGGATGATGGTGATGGATACGAATTCACAAAAGGAAATTATTTATTAACACACTATGTGGCTGAACTTAAATCATCGGTAGTTACTGTGAGGGTACACAAAACTGAAGGATCATGGGAAAGACCCAAACGCCGCCTGCATATTCAATTATTACTGGGTGGGTGTGCAATGCTTGATACATGGGGAAGTGATGGAGAAGTTCTGCAACTAATCTTGCCTTCAGAAGATGAGGTGTTGAAGGTAGTATCTACTAGTGAGAAGCATTACAAGGACCGTTTGGAAAAAGCAACTGCAATCCCTGATGTAGAAGAGGTTTCTGGAACCAAGGGAACAGTGCTTTCAAAAACTCCCATTGAGCTGAAAAATGGTGAATGGGATCTTAAAGTTGTTCCCTGGATTGGGGGTAGAATCATCTCCATGACACACATTCCCTCTGGAACACAATGGCTCCATAGCAGGATTGAGATCCATGGTTACGAGGAGTATAGTGGTACGGAGTATCGTTCTGCTGGGTGTTCTGAGGAGTATTCTGTCATTAATCGAGAACCTGGGCTGGTGGTGTTAGAGGTTGATATTGGTGGCGGATTGGTTCTTCGACGTCATATCTATGTTCCAAAGAATGTTCCCAATATCATCCGGATAGACTCTAGTATAATAGCCCGTAGTGTTGGAGCTGGTTCTGGAGGGTTCTCAAGGTTGGTTTGCTTAAGAGTTCACCCAACGTTCGTTGTTTTGCATCCGTCAGAATCTTTTGTTTCATTTACTTCAATGGATGGATCGGTGCATGAAGTCTTTCCAGATAGTGGGGAGCAATTCTTTGAAGGAAACCTTATTCCTAATGGTGAGTGGAGGCTTATTGATAAATGTCTTGGCTTGGCACTGGTGAACCGATTTAATGTTACTGAGGTATTCAAATGTCTCGTTCACTGGGGTAGTGGCACTGTCAACCTGGAGCTTTGGTCTGAGAGTAGGCCTGTTTCGGACCAATCCCCTCTTCGAATTTCCCATCAATACGAGGTTTTAAGAATCCCATAA 3150 0.434 MIEEALLVWCSSYKVGSLQYPSFLLSPLRYRHHLHLLLRNAPFSSSITALRRKRFCEKLVFKMASYEGQAVTSGSDVRSGSMIFEPILEDGVFRFDCSVNDRDAANPSISFANTRDRDTPISTQKVPSYIPTFECLLEQQVVKLELPVGSSLYGTGEVSGDLERTGKRVFTWNTDAWGYGPGTTSLYQSHPWVLAVLPNGEGLGILADTTRRCEIDLRRESTIQIVASSSHPVITFGPFASPTEVLISLSKAIGTVFMPPKWSLGYHQCRWSYLSDQRVLEVAKTFREKCIPCDVIWMDIDYMDGFRCFTFDKERFRDPSSLVKDLHYSGFKAIWMLDPGIKQEEGYFVYDSGSKNDVWVQKADGTPYVGEVWPGPCVFPDYTQSKVRAWWANLVKDFISNGVDGIWNDMNEPAIFKVATKTMPESNVHRGDGELGGCQNHSFYHNVYGLLMARSTYEGMKLANEKKRPFVLTRAGFSGSQRYASTWTGDNLSTWEHLHMSISMVLQLGLSGQPLSGPDIGGFAGNATPRLFGRWMGVGSMFPFCRGHSEAATADHEPWSFGEECEEVCRLALKRRYRLIPLIYTLFYFAHTRGTPVATPIFFADPKDPSLRKLENSFLLGPVLVYASTLQREGLDKMEITLPKGIWLSFDFNDAHPDLPALYLKGGSIIPVGLPLQHVGEANPSDDLTLLVALDEHGKAEGVLFEDDGDGYEFTKGNYLLTHYVAELKSSVVTVRVHKTEGSWERPKRRLHIQLLLGGCAMLDTWGSDGEVLQLILPSEDEVLKVVSTSEKHYKDRLEKATAIPDVEEVSGTKGTVLSKTPIELKNGEWDLKVVPWIGGRIISMTHIPSGTQWLHSRIEIHGYEEYSGTEYRSAGCSEEYSVINREPGLVVLEVDIGGGLVLRRHIYVPKNVPNIIRIDSSIIARSVGAGSGGFSRLVCLRVHPTFVVLHPSESFVSFTSMDGSVHEVFPDSGEQFFEGNLIPNGEWRLIDKCLGLALVNRFNVTEVFKCLVHWGSGTVNLELWSESRPVSDQSPLRISHQYEVLRIP 1049
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco4g00665 1049 Gene3D Glycosidases 256 429 - -
Phco4g00665 1049 Gene3D Glycosidases 430 603 - -
Phco4g00665 1049 Gene3D - 669 794 IPR013780 -
Phco4g00665 1049 SUPERFAMILY (Trans)glycosidases 251 594 IPR017853 -
Phco4g00665 1049 Gene3D - 604 668 IPR013780 -
Phco4g00665 1049 Pfam Domain of unknown function (DUF5110) 688 756 IPR033403 -
Phco4g00665 1049 Gene3D glycosyl hydrolase (family 31) 99 240 - -
Phco4g00665 1049 Pfam Glycosyl hydrolases family 31 241 670 IPR000322 GO:0004553|GO:0005975
Phco4g00665 1049 SUPERFAMILY Galactose mutarotase-like 141 222 IPR011013 GO:0003824|GO:0005975|GO:0030246
Phco4g00665 1049 Pfam Galactose mutarotase-like 151 216 IPR025887 -
Phco4g00665 1049 SUPERFAMILY Glycosyl hydrolase domain 596 655 - -
Phco4g00665 1049 CDD GH31_glucosidase_II_MalA 254 594 - -
Phco4g00665 1049 PANTHER ALPHA-GLUCOSIDASE 132 729 - -
Phco4g00665 1049 ProSitePatterns Glycosyl hydrolases family 31 active site. 405 412 IPR030458 -
Phco4g00665 1049 CDD GH31_N 142 254 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco4g00665 Phco-Chr4 5009515 5023248 Tandem
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco4g00665 4 5009515 5023248 Phco4g00665 4 5009515 5023248 ECH