Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco4g00662 ATGTCTCTCCTCAGCCGATTCTTCTACAAGCGTCCCCCTGATGGCTTACTGGAATTCGCGGACAGAGTCTATGTATTCGATTCCTGCTTCTCCACCGAAGCGCTTCCCGAGGGAATGTACCAGCTCTACCTCCGCCAAATCCTCTCCGACCTCCACGAGGACTTCCCGGAATCCTCCTTCCTCGCCCTCAACTTCCGCGACGGTCACACCCGCAGCCGCTTCTCACGCCTCCTCTGCGACCTCGACGCCACTGTCATCGACTACCCCAAGCAGTACGAGGGCTGCCCCCTCCTCCCCCTCTCCCTCCTCCACCACTTCCTCCGCCTCTGTGACACCTGCCTCGCTGACCCCGCCGCCGTGATACTCTTCCACTGTGAGCGCGGCGGCTGGCCCCTCCTCGCCTTTCTCCTCGCTGCTTTCCTCGTTTTCCGGAAGGCGCAGAGTGGGGAGCGCAAGATTCTAGAGATGGTTCACAGGGAGGCGCCGAAGGGACTGCTGCAACTGCTGTCGGCGCTCAACCCGATGCCGTCGCAGCTGCGGTATGTGCAGTATGTGGCGCGGAGGAACATTGGCGCAGAGTGGCCTCCGCCGGAGAGGGCGCTTTCTCTGGATTGTGTGATACTAAGAGGGGTTCCTGGGTTTGATGGGGGGAATGGTTGCAGGCCGTTTTTTCGGATTTTTGGGAGGAATTTGCTTAGTAAAGGCGGGCTTTCCACGCAGATGATTTATAATATGCATAAGAAGAAGAAGAGTTTGAGGCACTATAGACAGGCAGACTGTGATGTGATTAAGATTGATATTCAATGCTTAGTACAAGGGGATGTGGTGTTGGAGTGTGTGCATTTGGATTTGGATCCGGAGAGGGAGGTGATGATGTTTCGAGTGATGTTCAACACTGCGTTCATTCGGTCAAACATTTTGATGCTGAATGCTGAGAACTTGGACATTCTGTGGGATTCAAAGGAGCGGTATCCAAAGGGCTTCCGGGCTGAGGTTTTGTTTGGGGAGGTTGAAAACATAAGTCCTCAAAGGGCTCCCACAAGTATTTTAGATGGCGAGGTGAAAGGTGGATTACCCATTGAGGCATTTTCTAGGGTTCAAGAACTTTTCAGTGGCGCAGAATGGATTGACAGTGGTGATTCTGCTGCCGTATGGCTGCTCAAGCAGCTTACAGTCTTAAACGACCCGAAAGAGTTTTCAAGGTTTCAGGGTAGAGGAAGTTGGTATTCATCACCTGCTGACTCTGAAGAAGAAAACAATGAATCGAGCACCGCGGATAGTTCAGATGAGGCCTTTGATGTTATTCCTAGGTCTTATGCTGATCCTTCAAAATTATTTACATCTGATACACCTGATTTGGTCCATTTAACTTTTGAAAACAACGGTGGAGATTTTGTAAATCTAACTTCAATAACACCTAATCAGTCACTAACTGATGATGTTTCATTTCCTCATCATGCTCTAAGTAAGGAATCTTCTCCCTGTCTGTCCCCACCATCACAAGTTCCCGCTAATCAACCTCTTCATATACCAGCACCACTGCCTCCATCATCAATACCTGTACAGCCAAGTTTAGCTCCTCCCCATCCTCCCCCACCTCCGCATCCTTTAGTTCAGAATCTGAACAATGCTTCTACATTGCTTTCACCTCCTCCTCCACCCAGTCTCCCACCTATAGGTAGGGATGCGAATAGCACTCCTGGTTTACCTCCACATCCTCTAGGATTTGTACAAACAAGTTCAGCCCCTCCACCACCACCTCCTCCTCCTCCTCTTCCTCCTGCTCCAGTACCTGTACAAAAAAATTTAGTCCCTCCACCTCCTCCTCCTCCAGGTCCTATGCAAACAGGTTCAGCCCCACCACCACCTCCTCCTCCTCCAGGTCTTATACAAACAGGTTCTGTCCCACCACCACCTCCACCTCCTCCTGGTCCTGTACGAACAGGTTCAGCTCCACCTCCACCTCCGCCCCCTCAAGGTCCTGTACAAACAGGTTCAGCTCCACCTCCACCTCCACCTCCACCTCCAGCCCCTCCAGGTCTTGTACAAACAGGTTCTGTCCCGCCACCACCTCCACCTCCTCCTGGTCCTGGTCCTATACGAACAGGTTCAGCTCCACCTCCACCTCCACCTCCACCCCCACCTCCTCCAGGTCCTGTACAACCAAGTTCAGCTCCACCACCACCTCCACCTCCTCCAGGTCTTGTACCAACACATTCAGCTCCACCTCCTCCAGGTCTGGTACGAACAGGTTCAGCTCCACAACCACCACCTCCTCCTCCAGGTCCTGTACGAACAGGTTCAGCTCCACCACCACCTCCTCCTCCTCCAGGTCCTGTACGAACAGGTTTAGCTCCACCTCCACCTCCACCTCCTCCTGGTCCTGTACGAACAGGCTCAGCTGCTCCACCACCTCCACCTCCTCCAGGTCCTGTACAAACAGGTTCAGCTCCACCACCACCACCTCCTCCAAGCTTACGGACAGGTTCAGCTCCACCAGTGGCACCAAAGCCCCCAGGTCCTCCTCCTCCACCAGCTGGTCGTGGTGCATCTCCACCTCCTGCAGCTACAGGCTCTGGTGTGGCACCACCACCTGGCAAAGCTTCAACAACAAATGTTGGTAGAGGTCATGGTATTGGTGTTACTGTTAATGCTCCAAAGAAAACTTTGCTAAAGCCCCTACACTGGGTGAAAGTGGCCCGAGCAGCCAAGGGAAGTCTATGGGCTGATTCACAGAAACAGGATAGCAGACCAAGGGCCCCTGAGATAGATATATCAGAACTTGAGACCCTGTTTTCAGCCGCATCTGCATCTGATGGGAGTAATACTAAAGGTGGAGGCCGGCGTGGTCCTAATATTAACAAACCGGAGAAAGTACAATTGGTTGACTTGCGTAGAGCATATAACTGTGAAATAATGCTCTCTAAAATCAAAATTCCTTTACCAGATATGCTTAAAGCGGTACTGGCATTGGATTCTTTAGTTCTTGATATTGATCAGGTTGAGAATCTCATCAAGTTCTGTCCAACAAAGGAAGAGATGGAAGTGTTAAAGAATTATACAGGAAACAAGGAAATGCTTGGAAAGTGTGAACAGTTTTTTATGGAGCTGATGAAAGTTCCACGTGTGGAATCCAAATTAAGGGTTTTTGCTTTTAAAATCACCTTTTCTTCGCAGGTAAACGATTTGAAGGTAAATTTGAACACAATCAACAATGCAGCCAGAGAGGTGAAAGAATCTGGAAAATTGCGTCAAATAATGCAGACTATTCTTACTCTGGGAAATGCCTTGAATCAAGGAACAGCACGGGGATCAGCTGTTGGATTCAAATTGGATAGCCTTCTTAAATTATCTGATACTCGTGCAAGAAATAATAAAATGACTTTAATGCATTATTTGTGTAAGCTTCTTGCTGAGAAAATGCCAGAATTGCTAGATTTTGATAAGGATCTTGTCCATTTGGAAGCAGCTTCTAAGATTCAACTAAAAGCATTGGCTGAAGAAATGCAAGCTGTGAGTAAAGGTTTAGAGAAAGTTGAGCAAGAACTCGCTGCTTCTGAAAATGATGGTGCTATATCTACAGGATTTCGTAAGGTGTTGAAGAATTTTCTTGATATTGCTGAAGCTGATGTGAGGTCCCTTATATCATTGTATTCTGAAGTGGGAAGAAGTGCAGACTCTTTGTCCCAGTACTTTGGAGAGGATCCAGCTAGATGCCCCTTTGAACAAGTGACACAAATCCTTGTTGTCTTTGTCAAGATGTTCAACAAGTCAAGGGAGGAGAATGAAAGGCAGGCAGATGCTGAAAAAAAGAAATTAGAGAAAGAAGCCTTGAAGGAAAGGACAGCAAATAATTCACATTCCAAAAGAGACGTGATTCGGTAG 3885 0.4898 MSLLSRFFYKRPPDGLLEFADRVYVFDSCFSTEALPEGMYQLYLRQILSDLHEDFPESSFLALNFRDGHTRSRFSRLLCDLDATVIDYPKQYEGCPLLPLSLLHHFLRLCDTCLADPAAVILFHCERGGWPLLAFLLAAFLVFRKAQSGERKILEMVHREAPKGLLQLLSALNPMPSQLRYVQYVARRNIGAEWPPPERALSLDCVILRGVPGFDGGNGCRPFFRIFGRNLLSKGGLSTQMIYNMHKKKKSLRHYRQADCDVIKIDIQCLVQGDVVLECVHLDLDPEREVMMFRVMFNTAFIRSNILMLNAENLDILWDSKERYPKGFRAEVLFGEVENISPQRAPTSILDGEVKGGLPIEAFSRVQELFSGAEWIDSGDSAAVWLLKQLTVLNDPKEFSRFQGRGSWYSSPADSEEENNESSTADSSDEAFDVIPRSYADPSKLFTSDTPDLVHLTFENNGGDFVNLTSITPNQSLTDDVSFPHHALSKESSPCLSPPSQVPANQPLHIPAPLPPSSIPVQPSLAPPHPPPPPHPLVQNLNNASTLLSPPPPPSLPPIGRDANSTPGLPPHPLGFVQTSSAPPPPPPPPPLPPAPVPVQKNLVPPPPPPPGPMQTGSAPPPPPPPPGLIQTGSVPPPPPPPPGPVRTGSAPPPPPPPQGPVQTGSAPPPPPPPPPAPPGLVQTGSVPPPPPPPPGPGPIRTGSAPPPPPPPPPPPPGPVQPSSAPPPPPPPPGLVPTHSAPPPPGLVRTGSAPQPPPPPPGPVRTGSAPPPPPPPPGPVRTGLAPPPPPPPPGPVRTGSAAPPPPPPPGPVQTGSAPPPPPPPSLRTGSAPPVAPKPPGPPPPPAGRGASPPPAATGSGVAPPPGKASTTNVGRGHGIGVTVNAPKKTLLKPLHWVKVARAAKGSLWADSQKQDSRPRAPEIDISELETLFSAASASDGSNTKGGGRRGPNINKPEKVQLVDLRRAYNCEIMLSKIKIPLPDMLKAVLALDSLVLDIDQVENLIKFCPTKEEMEVLKNYTGNKEMLGKCEQFFMELMKVPRVESKLRVFAFKITFSSQVNDLKVNLNTINNAAREVKESGKLRQIMQTILTLGNALNQGTARGSAVGFKLDSLLKLSDTRARNNKMTLMHYLCKLLAEKMPELLDFDKDLVHLEAASKIQLKALAEEMQAVSKGLEKVEQELAASENDGAISTGFRKVLKNFLDIAEADVRSLISLYSEVGRSADSLSQYFGEDPARCPFEQVTQILVVFVKMFNKSREENERQADAEKKKLEKEALKERTANNSHSKRDVIR 1294
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco4g00662 1294 Coils Coil 1162 1189 - -
Phco4g00662 1294 Gene3D - 195 340 - -
Phco4g00662 1294 PANTHER FORMIN-J 787 1286 - -
Phco4g00662 1294 Gene3D Protein tyrosine phosphatase superfamily 15 189 IPR029021 -
Phco4g00662 1294 MobiDBLite consensus disorder prediction 404 431 - -
Phco4g00662 1294 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 198 337 IPR035892 -
Phco4g00662 1294 FunFam Formin-like protein 880 1267 - -
Phco4g00662 1294 MobiDBLite consensus disorder prediction 934 956 - -
Phco4g00662 1294 SMART PTEN_C2_2 196 336 IPR014020 -
Phco4g00662 1294 Pfam C2 domain of PTEN tumour-suppressor protein 197 335 IPR014020 -
Phco4g00662 1294 MobiDBLite consensus disorder prediction 1261 1294 - -
Phco4g00662 1294 MobiDBLite consensus disorder prediction 577 851 - -
Phco4g00662 1294 Coils Coil 1060 1080 - -
Phco4g00662 1294 SUPERFAMILY Formin homology 2 domain (FH2 domain) 956 1283 - -
Phco4g00662 1294 ProSiteProfiles Formin homology-2 (FH2) domain profile. 881 1281 IPR015425 -
Phco4g00662 1294 MobiDBLite consensus disorder prediction 500 538 - -
Phco4g00662 1294 Coils Coil 1256 1279 - -
Phco4g00662 1294 MobiDBLite consensus disorder prediction 934 948 - -
Phco4g00662 1294 MobiDBLite consensus disorder prediction 485 881 - -
Phco4g00662 1294 MobiDBLite consensus disorder prediction 404 418 - -
Phco4g00662 1294 SMART it6_source 527 1294 IPR015425 -
Phco4g00662 1294 Gene3D Formin, FH2 domain 882 1267 IPR042201 -
Phco4g00662 1294 ProSiteProfiles C2 tensin-type domain profile. 198 337 IPR014020 -
Phco4g00662 1294 Pfam Formin Homology 2 Domain 886 1256 IPR015425 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco4g00662 Phco-Chr4 4982713 4992858 Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco4g00662 4 4982713 4992858 Phco4g00662 4 4982713 4992858 ECH