Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Phco4g00648 | ATGGGTAATCCACGGAGATCGAAGGCCGCCGACGACCTTCATACGGCGGCAAGGTCCGGGGATCTCATCGCCGTTCAGTCAATTTTGGCTTCAAATCCTCTGGCCGTTAATTCCAGAGATAAGCATTCCAGAACACCTCTACATTTAGCGGCATTTTCTGGGCAAGCAGAGGTAGTCACTTATCTCTGCAACCACAAGGCTGATGCTGGTGCTTCTGCTATGGATGACATGGCTGCAATACACTTTGCTTCACAGAAGGGACATTTAGAAGTTGTTCGAGCTCTACTTTCAGCTGGAGCCTCTTTCAAAGCATTTACCCGCAAAGGCATGACTTCATTACACTATGCTGTTCAAGGTTCCCATCTGGAACTCGTCAAGTATTTGGCCAAGAAAGGGGCAAACCTTGGTGCCCAGACAAAGGCAGGAAAGACCCCTTTGGATCTTGCTAGCAATGAAGAAATCCGATCCTTTCTGGAGGAATTTGAGAAGTCAGCAAAGAATGGAGAATTGGGAAAGAAAGATAAAGATAAAGATAAAGCTGAAGAATTTGATCCCAAGACATCTGAATTGGGATCGGAAGGTGATTTGAATGCTGAACCTCCTGCAGCTGCTCTTGATGAAGAAACCAATGCAAGAGAAAAGAGAAAGGTTAATGAAGATGGCGCAAGAGTAGAGTCGTCACAACCAAAAAAAGCGAGAGTTAAGTTAAGCCATCTCCAAAGTTCAGATGATACCCAAGAAGAAGAGAACATGTAG | 756 | 0.4524 | MGNPRRSKAADDLHTAARSGDLIAVQSILASNPLAVNSRDKHSRTPLHLAAFSGQAEVVTYLCNHKADAGASAMDDMAAIHFASQKGHLEVVRALLSAGASFKAFTRKGMTSLHYAVQGSHLELVKYLAKKGANLGAQTKAGKTPLDLASNEEIRSFLEEFEKSAKNGELGKKDKDKDKAEEFDPKTSELGSEGDLNAEPPAAALDEETNAREKRKVNEDGARVESSQPKKARVKLSHLQSSDDTQEEENM | 251 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Phco4g00648 | 251 | ProSiteProfiles | Ankyrin repeat region circular profile. | 108 | 135 | - | - | |
| Phco4g00648 | 251 | PANTHER | ANKYRIN REPEAT PROTEIN | 7 | 237 | - | - | |
| Phco4g00648 | 251 | SMART | ANK_2a | 8 | 38 | IPR002110 | GO:0005515 | |
| Phco4g00648 | 251 | SMART | ANK_2a | 42 | 71 | IPR002110 | GO:0005515 | |
| Phco4g00648 | 251 | SMART | ANK_2a | 75 | 104 | IPR002110 | GO:0005515 | |
| Phco4g00648 | 251 | SMART | ANK_2a | 108 | 137 | IPR002110 | GO:0005515 | |
| Phco4g00648 | 251 | ProSiteProfiles | Ankyrin repeat profile. | 75 | 107 | IPR002110 | GO:0005515 | |
| Phco4g00648 | 251 | MobiDBLite | consensus disorder prediction | 206 | 245 | - | - | |
| Phco4g00648 | 251 | PRINTS | Ankyrin repeat signature | 43 | 58 | IPR002110 | GO:0005515 | |
| Phco4g00648 | 251 | PRINTS | Ankyrin repeat signature | 124 | 138 | IPR002110 | GO:0005515 | |
| Phco4g00648 | 251 | ProSiteProfiles | Ankyrin repeat profile. | 42 | 74 | IPR002110 | GO:0005515 | |
| Phco4g00648 | 251 | Gene3D | - | 6 | 183 | IPR036770 | - | |
| Phco4g00648 | 251 | MobiDBLite | consensus disorder prediction | 168 | 251 | - | - | |
| Phco4g00648 | 251 | ProSiteProfiles | Ankyrin repeat region circular profile. | 75 | 101 | - | - | |
| Phco4g00648 | 251 | MobiDBLite | consensus disorder prediction | 168 | 189 | - | - | |
| Phco4g00648 | 251 | ProSiteProfiles | Ankyrin repeat profile. | 108 | 140 | IPR002110 | GO:0005515 | |
| Phco4g00648 | 251 | Pfam | Ankyrin repeats (3 copies) | 80 | 158 | IPR002110 | GO:0005515 | |
| Phco4g00648 | 251 | Pfam | Ankyrin repeats (3 copies) | 13 | 70 | IPR002110 | GO:0005515 | |
| Phco4g00648 | 251 | SUPERFAMILY | Ankyrin repeat | 13 | 161 | IPR036770 | - | |
| Phco4g00648 | 251 | ProSiteProfiles | Ankyrin repeat region circular profile. | 42 | 68 | - | - |
Event-related genes
| Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
|---|---|---|---|---|---|---|---|---|---|
| Phco4g00648 | 4 | 4899686 | 4901489 | Phco4g00648 | 4 | 4899686 | 4901489 | ECH |