Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco4g00638 ATGAGACCCATCAGTTTCCCTGAATGTAGCTTGGACTATCAAGACTACACTCCATGCACAGATCCGAAGAGATGGAGAAAATATGGCACGTTCCGGCTTACTTTGTTAGAACGACATTGCCCTCCAATTTTTGAGAGGAAGGAATGCTTGGTTCCTCCACCAGATGGATACAAGCCTCCAATCAGATGGCCAAAGAGCAGAGATGAGTGTTGGTACAGGAATGTGCCGTATGACTGGATCAACAAGCAGAAGTCTAACCAGCATTGGTTGATTAAGGAAGGGGAGAAATTCCTGTTTCCAGGTGGGGGTACTATGTTTCCCAATGGTGTCGGTGAATATGTTGATATGATGCAAGAACTAATCCCAGAGATGAAAGATGGGACAGTGAGAACTGCCATTGATACTGGTTGTGGGGTTGCTAGCTGGGGTGGTGATTTGTTGGATCGGGGGATTCTAACAGTTTCTCTTGCTCCAAGAGATAACCATGAAGCTCAAGTTCAATTTGCTCTAGAGCGTGGTATACCAGCTATTCTTGGTGTCATTTCTACACAGAGACTTCCTTTCCCATCAAACTCCTTTGACATGGCTCATTGCTCCAGATGCCTTATCCCATGGACGGAATTTGGTGGTATTTATCTCATGGAAATACACCGTATTCTTCGTCCCGGTGGATTTTGGGTTTTGTCTGGTCCACCTGTGAACTACGAGCACAGGTGGCGTGGATGGAACACAACCGTTGCCGAGCAAAAAACAGATTATGAAAATTTGCAGAATTTACTCACTTCAATGTGCTTTACATTGTACAATAAAAAGGAGGACATTGCTGTATGGCAGAAGGCTAAAGATAACAGTTGCTACGAGAAGCTTCCTAAAGAGACCTACCCACCAAAGTGTGATGACAGCCTTGAACCAGATTCAGGATGGTACACTCCACTTCGTGCTTGTTTTGTGCTTCCAGATCCAAAATATACGAAATCTGTTCTCACTTACATGCCTAAATGGCCTGAACGGTTGCATGCTACACCTGAAAGAATCACAACTGCTCATGGTGCTAGTACTAGTGGTAGTATTAATACTTTTCATCATGACGATGGCAAGTGGAAAAAACGCATTCAGCACTACAAGAAGTTGCTGCCCGAGCTTGGCACTGACAAAATAAGAAATGTCATGGACATGAATACAGTGTATGGAGCTTTTGCTGCAGCCTTGATCAATGATCCCCTTTGGGTCATGAATGTGGTCTCATCTTATGGTCCCAACACACTCCCTGTGGTTTATGATCGAGGCCTTATTGGAACCTTCCATGACTGGTGTGAGGCCTTTTCAACATATCCTCGAACCTATGACCTCCTTCATCTTGATGGATTCTTCACTGCAGAAAACCACAGATGTGAAATGAAGTATGTGTTGTTGGAGATGGACCGAATTTTAAGGCCTGGTGGCCATGCTATCATTCGAGAGTCCACTTATTTTGTGGATGCTGTTGCTACTATTGGGAAGGGCATGCGATGGATATGTCGCAAAGAAAAGACAGAGTATGGAGTTGACAAAGAGAAGGTTTTGATATGCCAGAAAAAGCTATGGCATTCATCCAACACAGGTTCAAGATGA 1611 0.442 MRPISFPECSLDYQDYTPCTDPKRWRKYGTFRLTLLERHCPPIFERKECLVPPPDGYKPPIRWPKSRDECWYRNVPYDWINKQKSNQHWLIKEGEKFLFPGGGTMFPNGVGEYVDMMQELIPEMKDGTVRTAIDTGCGVASWGGDLLDRGILTVSLAPRDNHEAQVQFALERGIPAILGVISTQRLPFPSNSFDMAHCSRCLIPWTEFGGIYLMEIHRILRPGGFWVLSGPPVNYEHRWRGWNTTVAEQKTDYENLQNLLTSMCFTLYNKKEDIAVWQKAKDNSCYEKLPKETYPPKCDDSLEPDSGWYTPLRACFVLPDPKYTKSVLTYMPKWPERLHATPERITTAHGASTSGSINTFHHDDGKWKKRIQHYKKLLPELGTDKIRNVMDMNTVYGAFAAALINDPLWVMNVVSSYGPNTLPVVYDRGLIGTFHDWCEAFSTYPRTYDLLHLDGFFTAENHRCEMKYVLLEMDRILRPGGHAIIRESTYFVDAVATIGKGMRWICRKEKTEYGVDKEKVLICQKKLWHSSNTGSR 536
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco4g00638 536 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 49 242 IPR029063 -
Phco4g00638 536 Gene3D Vaccinia Virus protein VP39 104 286 IPR029063 -
Phco4g00638 536 PANTHER SAM-DEPENDENT METHYLTRANSFERASE 5 529 IPR004159 GO:0008168
Phco4g00638 536 FunFam probable methyltransferase PMT21 104 282 - -
Phco4g00638 536 Pfam Putative S-adenosyl-L-methionine-dependent methyltransferase 15 525 IPR004159 GO:0008168
Phco4g00638 536 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 364 516 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco4g00638 Phco-Chr4 4829477 4832009 Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco4g00638 4 4829477 4832009 Phco4g00638 4 4829477 4832009 ECH
Phco4g00638 4 4829477 4832009 Phco8g00214 8 1988115 1993087 PCT