Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco4g00610 ATGTCGTCGAAGGTTGTGTACGAAGGGTGGATGGTGCGGTGCGGCAGACGGAAGATCGGGCGATCGTTCATCCACATGAGGTACTTCGTTTTGGAGTCCCGGCTGCTCGCGTATTACAAGAGGAAACCGCAGGATAATCAGGTCCCAATTAAAACACTGCTAATTGACGGCAACTGTAGAGTGGAGGATAGAGGCTTGAAGACTCATCATGGACATATGGTTTATGTTTTGTCTGTTTACAGCAAGAAAGAAAAGAACCATCGAATTATGATGGCAGCATTTAACATCCAAGAGGCCCTAATTTGGAAGGAAAAAATAGAGTATGTCATTGATCAGCACCAGGGAGCTCAACCATCAAATGGCAACAAATATATTTCTTTTGAGTACAAATCTGGGATGGACAATGGAAAGACAGCTTCTTCCTCAGATCGTGAAAGCCAGTTCAGTGCTCCAGAGGATGAAGATGATCCTCATCCTAATTTGTTAAGGAGGACAACAATTGGAAATGGCCCTCCTGAATCAGTTTTCGACTGGACCCGGGAAATAGATTCAGATTTTTCAAATCAGAATATCAACAACCAAGCATTCTCAAGAAAGCATTGGCGTCTTTTACAATGTCAAGATGGACTTCGTATTTTTGAAGAACTTGTTGAAGTTGATTACCTTCCAAGGAGCTGCAGTAGAGCTATGAAGGCAGTAGGTGTTGTGGAGGCGACTTGTGAAGAAATTTTTGAACTTGTGATGAGCATGGATGGGACACGGTTTGAATGGGATTGCAGTTTCCTACATGGTAGTTTAGTTGAGGAGGTGGATGGGCATACAGCAGTTCTTTATCATCGACTTCAGCTAGATTGGTTCCCAATGTTTGTGTGGCCCCGTGATCTTTGTTATGTACGATATTGGCGCCGAAATGATGATGGAAGTTATGTTGTTTTATTTTGCTCTAGGGAGCATGAAAACTGTAGTCCACAGCCAGGGTGGGTTCGAGCACATATTGAGAGTGGAGGATTTAATATTTCCCCCTTAAAACCTCGAAATGGAAGGCCCAGGACGCAAGTCCAGCATCTTATGCAGATTGATCTGAAGGGATGGGGTGTGGGTTACCTGTCATCTTTTCAGCAGTATTGTGTCCGTCAAATGTTAAATAGTGTAGCTGGTTTACGTGAATGGTTTGCCCAATCGGATGAAAGAAACGCCCATCCAAGAATTCCTGTCATGGTTAACATGTCCTCAACATCTGTTTCTTCAAAGAAGAATCAGAAGCCAAATGATTTTTCTGTCAATCCTTCTTCTCTTGATCAAATGAATTCTGCAAGCAGAAACTCTGCCTTGATAGATGAGTATTCTGATGATGAAGATTTTCAAATAGCGGAATCTGAACAAGAGGCATACCAAATTGGTCTCGAGAATGATGTGAAAAGAACAGCTTTGGAAGAAGAACCTGGAAATGAAATTGACTCGTCTTCATTTTCGGGAAATTTGCGCCGGGATGACCGAGATAATGCTCGGGACTGCTGGAAAATTTCTGAGGGAAATAACTTCAGAGTCAGAAGCAAGCATTTTTGCTATGACAAGTCGAAGGTTCCTGCCGGAAAACATATGCTGGATCTTGTTGCTGTAGATTGGTTTAAAGACTCAAAAAGAATGGACCATGTGGCTAGGCGTCATGGTTGTGCAGCACAAGTTGCTTCCGAAAAAGGATTTTTCACCATTGTCATTAATCTTCAAGTGCCTGCATCAACACACTATAGTATGGTTTTTTATTTTGTGACAAAGGAGTTAGTTTCTGGATCCCTCTTGCATCGCTTTGTTGATGGTGATGATGAGTTTCGAAACAGCAGGTTTAAGCTTATACCATCAGTCCCTAAGGGTTCATGGATTGTACGCCAGAGTGTTGGGAGTACTCCTTGTTTGCTCGGAAAGGCAGTTGATTGCAACTACATTCGTGGTCCCAAGTATTTAGAAATTGATGTTGATATTGGTTCCTCTACTGTTGCTAATGGAGTTTTGGGGCTGGTTATTGGTGTGATTACAACATTGGTTGTAGATATGGCTTTTCTTGTACAGGCAAATACTCCGGATGAGTTGCCCGAGAGGCTTATTGGAGCTGTTCGTATTTCTCACTTAGAGCTCAAATCTGCCATCGTCCCAAAACTGGAACCGGATCCATCATGA 2175 0.4271 MSSKVVYEGWMVRCGRRKIGRSFIHMRYFVLESRLLAYYKRKPQDNQVPIKTLLIDGNCRVEDRGLKTHHGHMVYVLSVYSKKEKNHRIMMAAFNIQEALIWKEKIEYVIDQHQGAQPSNGNKYISFEYKSGMDNGKTASSSDRESQFSAPEDEDDPHPNLLRRTTIGNGPPESVFDWTREIDSDFSNQNINNQAFSRKHWRLLQCQDGLRIFEELVEVDYLPRSCSRAMKAVGVVEATCEEIFELVMSMDGTRFEWDCSFLHGSLVEEVDGHTAVLYHRLQLDWFPMFVWPRDLCYVRYWRRNDDGSYVVLFCSREHENCSPQPGWVRAHIESGGFNISPLKPRNGRPRTQVQHLMQIDLKGWGVGYLSSFQQYCVRQMLNSVAGLREWFAQSDERNAHPRIPVMVNMSSTSVSSKKNQKPNDFSVNPSSLDQMNSASRNSALIDEYSDDEDFQIAESEQEAYQIGLENDVKRTALEEEPGNEIDSSSFSGNLRRDDRDNARDCWKISEGNNFRVRSKHFCYDKSKVPAGKHMLDLVAVDWFKDSKRMDHVARRHGCAAQVASEKGFFTIVINLQVPASTHYSMVFYFVTKELVSGSLLHRFVDGDDEFRNSRFKLIPSVPKGSWIVRQSVGSTPCLLGKAVDCNYIRGPKYLEIDVDIGSSTVANGVLGLVIGVITTLVVDMAFLVQANTPDELPERLIGAVRISHLELKSAIVPKLEPDPS 724
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco4g00610 724 ProSiteProfiles START domain profile. 201 383 IPR002913 GO:0008289
Phco4g00610 724 SUPERFAMILY PH domain-like 2 120 - -
Phco4g00610 724 SUPERFAMILY Bet v1-like 185 366 - -
Phco4g00610 724 Pfam START domain 227 374 IPR002913 GO:0008289
Phco4g00610 724 Gene3D - 1 120 IPR011993 -
Phco4g00610 724 MobiDBLite consensus disorder prediction 135 174 - -
Phco4g00610 724 ProSiteProfiles PH domain profile. 4 111 IPR001849 -
Phco4g00610 724 PANTHER ENHANCED DISEASE RESISTANCE-RELATED 21 719 IPR045096 -
Phco4g00610 724 SMART START_1 181 393 IPR002913 GO:0008289
Phco4g00610 724 MobiDBLite consensus disorder prediction 410 437 - -
Phco4g00610 724 Gene3D - 201 403 IPR023393 -
Phco4g00610 724 SMART PH_update 5 113 IPR001849 -
Phco4g00610 724 MobiDBLite consensus disorder prediction 147 161 - -
Phco4g00610 724 Pfam Protein ENHANCED DISEASE RESISTANCE 2, C-terminal 506 709 IPR009769 -
Phco4g00610 724 CDD START 193 369 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco4g00610 Phco-Chr4 4607743 4625237 Dispersed/Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco4g00610 4 4607743 4625237 Phco4g00610 4 4607743 4625237 ECH