Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco4g00586 ATGCGACCCGATTTGCTTCTTCATCGGTGGTCTTCTTCCTCCGTCGTGATCTTGTTAGGGTTCGCAGAATTGAACTTTCCCTTCATTTCTTCACTTCACATCCACGTTGAGCTTCTTCGCGGTTTTTGTTCTGACAATCCAAGAAATCAACAGTATCCCAGTGCACGCATTAAAGCACTTGAAAGAAAGATGCAGAAATTGGGAGAGTTCAAACTGCCACATTTCTTCAATTACCCACCCTACTTCACTTTGCAGCCAGTAAGAGACACAAGAGAGAAGCAGATACAACTCTGGAAAGAGCTTATTTTGGATTATTGTAAATCACAAAAGACATTTGTAATTGCCATTGAAGAAGAATTTCCTCTATTTACAAATCATGTAATTGAAAGGTCTCTTACTCACGAGGCCAAAGAAACTTTCCTTTCTGCGTTAGTTTCTGAAGGCCGTGCAGAATGGATGGATAAAGGACACAGGAGATGTCTTATTCTCTGGCATCGGATTCAAGATTGGGCTGACATTTTAATACAATTTGCAAAAGACAATGGGCTAGAAGATGGTGTAGTCACGATTGAAGAAATAAGATCAGGGCCCGAGTCTCAGGGAACAGAGCTTCATGGAATTGATCGAACTATTTTGAATCGTGCACTGAAACTATTAGAACAGAAAGGAAAGCTTGTGGTCTTTAAAGGAACTTCAACTGACGATGAAGGAGTTAAATTTTCTATATAA 729 0.4005 MRPDLLLHRWSSSSVVILLGFAELNFPFISSLHIHVELLRGFCSDNPRNQQYPSARIKALERKMQKLGEFKLPHFFNYPPYFTLQPVRDTREKQIQLWKELILDYCKSQKTFVIAIEEEFPLFTNHVIERSLTHEAKETFLSALVSEGRAEWMDKGHRRCLILWHRIQDWADILIQFAKDNGLEDGVVTIEEIRSGPESQGTELHGIDRTILNRALKLLEQKGKLVVFKGTSTDDEGVKFSI 242
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco4g00586 242 Pfam ESCRT-II complex subunit 76 208 IPR008570 GO:0000814|GO:0071985
Phco4g00586 242 SUPERFAMILY "Winged helix" DNA-binding domain 165 240 IPR036390 -
Phco4g00586 242 PANTHER VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN VPS25 62 241 IPR008570 GO:0000814|GO:0071985
Phco4g00586 242 Gene3D - 67 163 IPR014041 -
Phco4g00586 242 FunFam vacuolar protein-sorting-associated protein 25 163 241 - -
Phco4g00586 242 FunFam Vacuolar protein sorting-associated protein 25 68 163 - -
Phco4g00586 242 Gene3D - 164 241 IPR036388 -
Phco4g00586 242 SUPERFAMILY "Winged helix" DNA-binding domain 70 170 IPR036390 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco4g00586 Phco-Chr4 4426506 4430474 Dispersed/Proximal
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco4g00586 4 4426506 4430474 Phco4g00586 4 4426506 4430474 ECH