Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco4g00527 ATGTCGGTGAGTTCTCACCGCACCGTTTCGGTCTCTCAATCCGCAAGCTTCAGAATTTTAATACTAGCATTCTTTTCCCAGATAAAAACTGTCAAAGTCGATAATGTTTCCTTGGGAGCAACTGAACAAGACATTGAGGAGTTCTTTTCATTTTCTGGTGGCATTCAATATGTTGAACTACAGAGCCATGATGAACGATCTCAAACTGCTTATATTACCTTCAAGGAACCACAGGGAGCTGAGACTGCCGTACTTCTTTCGGGTGCAACGATAGTGGATATGTCAGTTACAATAACTCTGGATCCATATTACCAGCTTCCACCGGCTGCCTTTACATCATCTGACAATCAAACTCAAACTCCTGGTGGTGCTGAATTTGCTTTACGGAAGGCAGAGGATGTGGTCTCTGGCATGCTAGCCAAGGGCTTTATCTTAGGGAAAGATGCTGTCAGCCAAGCAAAAGCTTTTGACGATAAGCACCAGTTATCGTCCACAGCCTCAGCAAAAGTTGCATCTTTTGATCAGAAAATCGGGCTTACTGAGAAAATAAGTGCTGGTGCTACAGTTGTTGGTGATAGAGTTCGAGAAGTGGATCAAAAATTTCAGGTTTCAGAAAAGACCAAATCAGCATTTGCAGCTGCAGAAAAGACAGTCAGCAATGCTGGTTCTTCCATAATGAAGAATCGGTATGTGCTTACTGGGACATCCTGGGTCACAGGTGCTTTTAGTAAGGTTTCTAAGGCCGCTGGGGAAGTAGGACAGAAGACTAGAGAGAAAGTGGCGAGTGAAGAACAGCAACAGAAACGAAATGTGGAAGATCAGCACGCACAGGTCCTTTCTGAGGCCCCCAAAGCAGCAGAAGCAAGTGAGCAGAAGCCTTCTAGGCCTGCTCCTGCTCAGGGTTTGATCCTTTGA 915 0.4514 MSVSSHRTVSVSQSASFRILILAFFSQIKTVKVDNVSLGATEQDIEEFFSFSGGIQYVELQSHDERSQTAYITFKEPQGAETAVLLSGATIVDMSVTITLDPYYQLPPAAFTSSDNQTQTPGGAEFALRKAEDVVSGMLAKGFILGKDAVSQAKAFDDKHQLSSTASAKVASFDQKIGLTEKISAGATVVGDRVREVDQKFQVSEKTKSAFAAAEKTVSNAGSSIMKNRYVLTGTSWVTGAFSKVSKAAGEVGQKTREKVASEEQQQKRNVEDQHAQVLSEAPKAAEASEQKPSRPAPAQGLIL 304
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco4g00527 304 MobiDBLite consensus disorder prediction 254 275 - -
Phco4g00527 304 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 29 103 IPR000504 GO:0003723
Phco4g00527 304 Gene3D - 26 99 IPR012677 -
Phco4g00527 304 PANTHER SERINE/ARGININE-RICH SPLICING FACTOR 28 267 - -
Phco4g00527 304 SUPERFAMILY RNA-binding domain, RBD 27 100 IPR035979 GO:0003676
Phco4g00527 304 SMART rrm1_1 30 99 IPR000504 GO:0003723
Phco4g00527 304 FunFam RNA recognition motif-containing protein 24 99 - -
Phco4g00527 304 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 33 91 IPR000504 GO:0003723
Phco4g00527 304 Coils Coil 261 281 - -
Phco4g00527 304 MobiDBLite consensus disorder prediction 254 304 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco4g00527 Phco-Chr4 3791651 3794765 Dispersed/Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco4g00527 4 3791651 3794765 Phco4g00527 4 3791651 3794765 ECH