Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Phco4g00509 ATGTGTGTCGGAATGTGTCTGGTTTCTACAATGGCCCGTCCTCATCGTCTTGGTTGTGGCTCTTCGCAGGTTTCTTTGGGGCCCTTTCCAAGATCTGGTGGCTCCTCACAGTGTTTCTCCAACCCTCGTTCACTCACTCCAGTTCGTTTTTCACCGTCTCCTAGTCCTTCTAAGAAACAAACAAAACCCATAAACATTTCTCCTACCAAGATGGCAGCGAGCAACAATGTGATTGTATGCATAAACTTCGTGGCCGTGATCCTCTCAATCCCGATCATCGGTGCCGGAATCTGGCTATCAAACGGGCAAGCAGATTCCTGCGTACAGTTTCTGCAATGGCCCGTCATCATCCTGGGAGTTCTCATCTTGGTGGTGGCTCTCGCAGGTTGCATTGGAGCCTTTTTCAGAATCACATGGCTCCTAGTAGTGTACCTCGTTGCCATGCTCGTGCTGGTGATACTGCTAGTGTGTCTTGTGGGCTTTGTTTACATGGTCACGCTTCGAGGTCATGGCAACATTGAAGCTGACCGGGCTTACTTGCAATATCACATGAACGACTTTTCTGGGTTCCTTCGCCGAAGGGTTAGAAGCTCCTTCAAGTGGGATCGCATCAGAAGCTGCATTGGCCAAACCAACGTGTGTGCTGAGCTCAACCAGAGTTACCGAATGGCCGAGGACTTCTTCAACGCACGTCTAACGCCCATGCAGTCAGGGTGCTGCAGGCCACCAACGCAATGTGGGTATACGTTTGTGAACCCAACCTATTGGATTAGAGCGTTCAACCTAGCAGCAGATATGGATTGCCTGCAATGGAGCAACGATCAAACACAACTTTGCTACAACTGTGACTCGTGCAAGGGCGGTTTATTGGCTAATCTTAGGAAGGAATGGAAAAGGGCCAATGTGATATTAATCATCACAGTCATTCTTCTAATTGTGGTTTATTTGATAGGGTGCTGTGCCTTTAGGAATGCCAAAACTGAGGACCTCTTCCGCAAATACAAACAGGGGTATACTTGA 1020 0.4863 MCVGMCLVSTMARPHRLGCGSSQVSLGPFPRSGGSSQCFSNPRSLTPVRFSPSPSPSKKQTKPINISPTKMAASNNVIVCINFVAVILSIPIIGAGIWLSNGQADSCVQFLQWPVIILGVLILVVALAGCIGAFFRITWLLVVYLVAMLVLVILLVCLVGFVYMVTLRGHGNIEADRAYLQYHMNDFSGFLRRRVRSSFKWDRIRSCIGQTNVCAELNQSYRMAEDFFNARLTPMQSGCCRPPTQCGYTFVNPTYWIRAFNLAADMDCLQWSNDQTQLCYNCDSCKGGLLANLRKEWKRANVILIITVILLIVVYLIGCCAFRNAKTEDLFRKYKQGYT 339
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Phco4g00509 339 Pfam Tetraspanin family 76 321 IPR018499 GO:0016020
Phco4g00509 339 ProSitePatterns Transmembrane 4 family signature. 119 141 IPR018503 GO:0016020
Phco4g00509 339 MobiDBLite consensus disorder prediction 45 64 - -
Phco4g00509 339 PRINTS Transmembrane four family signature 76 99 - -
Phco4g00509 339 PRINTS Transmembrane four family signature 108 134 - -
Phco4g00509 339 PANTHER TETRASPANIN-8-RELATED 71 328 IPR044991 GO:0009734|GO:0016020
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Phco4g00509 Phco-Chr4 3631194 3633535 Dispersed/Wgd
       

Event-related genes


Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco4g00509 4 3631194 3633535 Phco4g00509 4 3631194 3633535 ECH
Phco4g00509 4 3631194 3633535 Phco8g00155 8 1395882 1396959 PCT