Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco4g00489 ATGGAGCAGATAAGCATCGTCCACCATAAGCTCATAGCATATCTTCATTGGAGACAGAGACACAGACACAGCGAGTTTCTGAGATATCCTGTGTCGTCATCTCAACAACCTCTGGTGTGTTTCACATTTGGTTTAGTATCTGTCATCTTCAGAAACAACCCACCTCACATAACAACCCTTTGTCTTGATTTTGAACCCCCTTCATTTCAATCAATACTACCATTCCTTCTTCATCCCATCCTCTTCCATTCTACATACAATTCTGCCTCTTTTCTTCACTCTGGGCTTTTGACGAAAGTGTTGGTTCAACTTCATTCTTTTTTTTCATCTATTTATTTGGGAACCAGTGAAATCACGATGGGAGATGTGGCAAAGGACCTAACTGCTGGGACTATTGGAGGGGTAGCACAATTGATAGTTGGACACCCATTTGACACCATCAAGGTCAAGCTCCAAAGCCAGCCTATACCCCTCCCCGGCCAGCTTCCCAGGTATTCTGGTGCAATTGATGCTGTCAAGCAGACAGTGGCAGCTGAAGGTCCAAGGGGTTTATACAAGGGTATGGGAGCCCCACTTGCCACAGTAGCAGCCTTCAATGCTATTCTGTTTACTGTTAGGGGGCAAATGGAAACATTACTTAGGTCGCATCCTGGTGCTACCCTCACAGTAAATCAGCAGGTTATTTGCGGAGCTGGAGCTGGAATTGCTGTTTCCTTTCTAGCTTGTCCTACTGAATTGATCAAATGCAGATTGCAAGCACAAAGTGCATTAGCTGGCACTGGAACAGCTACCGTGGCAGTGAAATATGGGGGGCCCATGGATGTGGCCAGGCAAGTTCTCAGGTCAGAAGGGGGCATAAGAGGTCTGTTCAAGGGCTTGGTTCCCACTATGGCTCGTGAAGTACCTGGAAATGCTGCAATGTTTGGTGTATATGAAGCATTAAAGCGATTACTTGCTGGTGGCACTGATACCTCGGAACTGGATAGAGGTTCTCTGTTGCTTGCTGGAGGCTTGGCTGGAGCTGCCTACTGGCTCGCAGTGTACCCAACTGATGTTGTTAAGAGTGTGATTCAAATAGATGATTACAAAAACCCGAAGTTCTCTGGTTCAATTGATGCTTTCAGAAGAATTTCAGCTTCTGAGGGGTTCAGAGGCCTATATAAGGGTTTTGGTCCAGCAATGGCCCGAAGTGTTCCTGCTAATGCAGCTTGCTTCTTGGCATATGAGATGACAAGATCAGCTCTTGGATGA 1251 0.4628 MEQISIVHHKLIAYLHWRQRHRHSEFLRYPVSSSQQPLVCFTFGLVSVIFRNNPPHITTLCLDFEPPSFQSILPFLLHPILFHSTYNSASFLHSGLLTKVLVQLHSFFSSIYLGTSEITMGDVAKDLTAGTIGGVAQLIVGHPFDTIKVKLQSQPIPLPGQLPRYSGAIDAVKQTVAAEGPRGLYKGMGAPLATVAAFNAILFTVRGQMETLLRSHPGATLTVNQQVICGAGAGIAVSFLACPTELIKCRLQAQSALAGTGTATVAVKYGGPMDVARQVLRSEGGIRGLFKGLVPTMAREVPGNAAMFGVYEALKRLLAGGTDTSELDRGSLLLAGGLAGAAYWLAVYPTDVVKSVIQIDDYKNPKFSGSIDAFRRISASEGFRGLYKGFGPAMARSVPANAACFLAYEMTRSALG 416
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco4g00489 416 ProSiteProfiles Solute carrier (Solcar) repeat profile. 221 317 IPR018108 -
Phco4g00489 416 SUPERFAMILY Mitochondrial carrier 122 409 IPR023395 -
Phco4g00489 416 PANTHER MITOCHONDRIAL BASIC AMINO ACIDS TRANSPORTER-RELATED 123 415 - -
Phco4g00489 416 Pfam Mitochondrial carrier protein 123 214 IPR018108 -
Phco4g00489 416 Pfam Mitochondrial carrier protein 332 415 IPR018108 -
Phco4g00489 416 Pfam Mitochondrial carrier protein 221 319 IPR018108 -
Phco4g00489 416 ProSiteProfiles Solute carrier (Solcar) repeat profile. 121 212 IPR018108 -
Phco4g00489 416 ProSiteProfiles Solute carrier (Solcar) repeat profile. 327 414 IPR018108 -
Phco4g00489 416 Gene3D Mitochondrial carrier domain 222 416 IPR023395 -
Phco4g00489 416 Gene3D Mitochondrial carrier domain 76 221 IPR023395 -
Phco4g00489 416 FunFam mitochondrial carnitine/acylcarnitine carrier-like protein 121 415 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco4g00489 Phco-Chr4 3474484 3479563 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco4g00489 4 3474484 3479563 Phco4g00489 4 3474484 3479563 ECH