Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco4g00461 ATGGCTTCACAAGCAGAGACAGAGCATCCCAACAAGGCTTTTGGATGGGCAGCACAGGACACATCTGGTCATCTCTCCCCCTTCAACTTCTCCAGAAGGGCAACAGGGGAGAATGATGTTGCATTCAAAGTACTGTACTGTGGAATATGTCACTCGGACTTACATATGTTAAAGAACGAGTGGGGCGTCTCAATCTATCCTCTTGTTCCTGGGCACGAGATTGCTGGTGTGGTGACAGAGGTGGGAAAAAATGTGCAAAAGTTCAAAGTTGGAGACAGAGTTGGTGTGGGTTGCATGGTTGGGTCCTGTCACTCCTGTCAAAGCTGTAGTGAAGATCTTGAGAATTACTGCTCCAAAATGATTCTCACATACAATGCCAAGTATGTTGATGGCACCATAACATACGGAGGCTACTCTGACTCAATGGTTGTAGATGAACAATTTGTGATTCGCATTCCAGATAACCTACCTCTTGATGCTGCTGCTCCTCTCCTGTGTGCTGGGATCACTGTGTATAGCCCTTTGAAATATTATGGACTTGACAAGCCTGGACTTCATATTGGTGTGGTTGGTCTTGGTGGGCTAGGTCACATGGCTGTCAAGTTTGGCAAAGCTCTTGGACTTAAGGTCACAGTAATCAGCACATCTCCCAGCAAAAAGAAGGAAGCCATTGAGCATATGGGGGCTGACTCATTTGTTGTTAGCCGTGAACAAGATGAAATGATGGCTGTAATGGGAACCTTTGATGGAATCATTGACACAGTTTCTGCTAACCATCCTCTCGTGCCTTTGATTGGCCTGTTGAAGCCTCATGGTAAATTAGTCATGGTTGGTGCACCGGAGAAGCCTCTGGAAGTTCCAGCATTTTCTTTACTTATGGGGAGGAAGCTGATCGGTGGCAGTGCAATTGGAGGGATAAAAGAGACGCAAGAAATGGTTGATTTTGCTGCCAAGCATGGTGTGAAACCTGATATCGAAGTTATTGGCATGGATTATGTGAACACTGCAATGGAGCGCCTCCTGAAAGCAGACGTGAAGTATCGATTTGTTATTGATATTGGAAACACGTTGAAGGCAAGTTCTTGA 1086 0.4567 MASQAETEHPNKAFGWAAQDTSGHLSPFNFSRRATGENDVAFKVLYCGICHSDLHMLKNEWGVSIYPLVPGHEIAGVVTEVGKNVQKFKVGDRVGVGCMVGSCHSCQSCSEDLENYCSKMILTYNAKYVDGTITYGGYSDSMVVDEQFVIRIPDNLPLDAAAPLLCAGITVYSPLKYYGLDKPGLHIGVVGLGGLGHMAVKFGKALGLKVTVISTSPSKKKEAIEHMGADSFVVSREQDEMMAVMGTFDGIIDTVSANHPLVPLIGLLKPHGKLVMVGAPEKPLEVPAFSLLMGRKLIGGSAIGGIKETQEMVDFAAKHGVKPDIEVIGMDYVNTAMERLLKADVKYRFVIDIGNTLKASS 361
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco4g00461 361 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 71 85 IPR002328 GO:0008270|GO:0016491
Phco4g00461 361 SMART PKS_ER_names_mod 23 351 IPR020843 GO:0016491
Phco4g00461 361 FunFam Uncharacterized protein 16 166 - -
Phco4g00461 361 Pfam Zinc-binding dehydrogenase 194 317 IPR013149 -
Phco4g00461 361 CDD CAD1 14 352 IPR047109 GO:0016616
Phco4g00461 361 Pfam Alcohol dehydrogenase GroES-like domain 38 151 IPR013154 -
Phco4g00461 361 SUPERFAMILY GroES-like 21 184 IPR011032 -
Phco4g00461 361 Gene3D - 16 353 - -
Phco4g00461 361 FunFam Cinnamyl alcohol dehydrogenase 167 323 - -
Phco4g00461 361 PANTHER ALDEHYDE REDUCTASE 6 356 IPR047109 GO:0016616
Phco4g00461 361 Gene3D - 167 323 - -
Phco4g00461 361 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 156 322 IPR036291 -
Phco4g00461 361 FunFam Putative cinnamyl alcohol dehydrogenase 6 324 353 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco4g00461 Phco-Chr4 3207968 3210948 Dispersed/Tandem
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco4g00461 4 3207968 3210948 Phco4g00461 4 3207968 3210948 ECH