Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco4g00399 ATGGCGTTGTTGGAGGAGAAGCGAGTGGAGGATGAGTTATCGTACCCGATTATGGTGGCGGAGCGAGTTCGCTCGGCGGTGGACGAGGCCGACTCGTTCAAACTTGAGTGCTCGGAGGTGTGGAAGCAGGTCGATCGCCTCCTTCAAATGCTCCGAACCCTCGTCCGCTTCGCCACGGCCACCACCACCTCCGCCGCGTCGCCGCCTCTCTATGAGCGTCCCATCCGCCGCGTTGCTGCCGAGACGGCGAAGAATCTCGACCGCGCTCTCGCCCTCGTGCGCAAGTGCAGGCGTCGGAGCATCCTGCACCGTGTCGTCTCCATCGTCAGCGCCGCCGATTTCCGGAAAGTGCTGGTCCACCTGGACGCGTCCGTGGGTGATATGAAGTGGCTCCTCAGCATCTTCGACGCCGACGGCGGCATTGTCCTCTCCCTCCCTCCGATCGCCAGCAACGACCCCATTCTATCTTGGGTATGGTCTTTCATCGCTTCCCTTCAAATGGGTCAATTAAACGATAGAATTGAGGCTGCGAATGAACTTGCCTCTTTAGCTCAAGATAACGATAGGAATAAGAAGATCATAGTTGAGGAATGCGGGGTGTCTCCTTTGTTGAAGCTTTTCAAGGAAGGCACTTCCCCTCCTGCTCAAATTGCTGCTGCCAGTGCTTTGTGTCATTTGGCTAATGATTTGGATAGGGTTAGAGTGATTGTGAGTGAGCTTGGTGTGCCTGCTGTTGTGCAGGTTCTCAGTGACTCCCCCGTGAGGGTTCAGACCCTGGCTGCCAATTTGGTTGCCAGGATGGCCAAGCATGACCCCATGGCTCAGGAGGATTTCGCCCGGGAGAACGTGATTAGACCGCTTGTGACACTCTTGTCGTTTGACACCTTTGTGGATGATCAATTGGGGCTTTTGGGGAAGCAAAGTATTCATTCCATTGTTCAGATTAATAAGGAGTTGGGAAAGGGTAGCCGGGGAGGTCGCCATTTTTCGAATTCCTACTCGAATTCGTATTTGTTTATGGAGGGAAGTAGCCGGGGAGGGAATCATAGGAAGGAGAGGGAGAATGAGGATCCTGCGGTGAAGCTTCAGCTGAAGGTTAGTTGCGCTGAGGCATTGTGGATGCTTGCGCGAGGGAGTGTGACCAACAGTAGGAAGATAACTGAGACCAAAGGGATGCTTTGTTTGGCTAAGATTGTTCAGAATGAGCAAGGAGAGCTGCAGTATAATTGCTTGATGACGATAATGGAGGTAACCGCAGCTGCTGAATCCAATGCTGACCTTCGTCGAGCAGCGTTTAAGACCAATTCTCCAGCTGCTAAGACTGTTGTGGAACAGCTGCTGAGGATAATTAAAGACGTGGATAGCCCGGCATTGCAAATTCCAGCTATGAAGTCCATTGGTGCGTTGGCTAGGACGTTTCCCGCTAGAGAGATTCGGGTAATTGAACCTCTAGTGACACAGATGAGTAGCAGAAATGCGGAAGTAGCAGATGAGGCAGCAGTTGCTCTTGCCAAATTTGCTTCTCCGGATAATTTCCTACATGTGGAGCATTCTAAGACGATAATTGAATTCAACGGCATCCCGGCACTGATGAGACTGCTTAGGAGTAATGAAGTTACCCAAATGCATGATGGGCTAATTCTTCTTTGCTACCTTGCACTTCATGCTGGCAACAGTGAGTCCTTGGAACAAGCGAGGGTGTTGACAGTGCTAGAAGGTGCAGACAGAACAGTTCTTCCTCAGCATATAAAGGAATTGGTCTCCAGGGCAATAATCCACCTTAATTTGTATCATGCAGGAATGAATTCTCAAAGGATGCCATATTTGCCTTGA 1833 0.5117 MALLEEKRVEDELSYPIMVAERVRSAVDEADSFKLECSEVWKQVDRLLQMLRTLVRFATATTTSAASPPLYERPIRRVAAETAKNLDRALALVRKCRRRSILHRVVSIVSAADFRKVLVHLDASVGDMKWLLSIFDADGGIVLSLPPIASNDPILSWVWSFIASLQMGQLNDRIEAANELASLAQDNDRNKKIIVEECGVSPLLKLFKEGTSPPAQIAAASALCHLANDLDRVRVIVSELGVPAVVQVLSDSPVRVQTLAANLVARMAKHDPMAQEDFARENVIRPLVTLLSFDTFVDDQLGLLGKQSIHSIVQINKELGKGSRGGRHFSNSYSNSYLFMEGSSRGGNHRKERENEDPAVKLQLKVSCAEALWMLARGSVTNSRKITETKGMLCLAKIVQNEQGELQYNCLMTIMEVTAAAESNADLRRAAFKTNSPAAKTVVEQLLRIIKDVDSPALQIPAMKSIGALARTFPAREIRVIEPLVTQMSSRNAEVADEAAVALAKFASPDNFLHVEHSKTIIEFNGIPALMRLLRSNEVTQMHDGLILLCYLALHAGNSESLEQARVLTVLEGADRTVLPQHIKELVSRAIIHLNLYHAGMNSQRMPYLP 610
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco4g00399 610 SMART arm_5 186 228 IPR000225 GO:0005515
Phco4g00399 610 SMART arm_5 229 269 IPR000225 GO:0005515
Phco4g00399 610 SMART arm_5 514 554 IPR000225 GO:0005515
Phco4g00399 610 SMART arm_5 468 508 IPR000225 GO:0005515
Phco4g00399 610 SUPERFAMILY ARM repeat 167 571 IPR016024 -
Phco4g00399 610 Gene3D - 11 134 IPR036537 GO:0007166
Phco4g00399 610 PANTHER ARMADILLO REPEAT ONLY 4 8 598 - -
Phco4g00399 610 Gene3D - 160 321 IPR011989 -
Phco4g00399 610 Coils Coil 167 187 - -
Phco4g00399 610 Gene3D - 353 585 IPR011989 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco4g00399 Phco-Chr4 2618948 2620780 Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco4g00399 4 2618948 2620780 Phco4g00399 4 2618948 2620780 ECH