Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco4g00386 ATGTCAGCAACATGTAAACTAGGAGACAACCTAAGCTTAAACGATGAAACCAACCAACCCTTCTCACCTCCTCCTCCACTACACGCCCAAAAATATGCTGCCAATTCAGTGAAGATGATGATCTCAGAGCTAAGAGTTCAACGAGGTATAGCCCTTCCAATGGTGGCCATGAATTTGGCTTGGTTTGCCAAGACAGCCATCACAACAGCTTTTTTAGGCCGTCTCGGGGAGCTCAGTTTAGCAGGTGGAGCTCTCGGCTTCACTTTTGCTAATGTGACTGGATTCTCTGTTCTCAATGGTCTATGCGGTGCCATGGAACCCATATGTGGCCAGGCTCATGGTGCCAAAAACTTCAGGCTCCTTCACAAGACCCTTTTCATGACAATCTTATTGCTGTTGTTAGTATCACTTCCCATCACTTTCTTGTGGCTTAATGTTGACAAAATTTTGATTCATTTTGGCCAACAGCAAGACATCTCCATTGTGGCCAGGACCTATCTTTCCTCTCTCATACCCGACTTGTTTGTTGCCTCGCTCTTCTGTCCCTTAAAAGCTTACTTGAGCTCTCAGAGCATAACTCTTCCCACCATGTTTAGTTCGGTTGTGGCACTAGCTTTCCACATACCCGTTAACATAGTGCTTTCAAAGACCATGGGCCTCAGAGGAGTCTCCATGGCGGTTTGGATTACTGACCTTATTGTTGTGGTTCTGCTAGCCATTTATGTTTTAATTCTTGAGAACAAAAAGGGAAGCATGTGGAAGGAAGGAGGGTGGTGGGATCAGAGCATTGAGGATTGGATTAGGCTGGTCAAGCTTTGTGGATCATGCTGCCTCAATACATGCCTTGAGTGGTGGTGCTATGAGATCCTAGTTTTGCTTACTGGCCACCTCACAAATGCTAAGCAAGAAGTGGGAGTTTTGGCCATTGTGCTAAACTTCGACTATTTGCTTTTCTCAGTGATGCTGTCCCTAGCCACATGTGTTTCCACCCGTGTCTCAAATGAGCTTGGTGCTAACCAAGCTGGGCTTGCTTACCGATCAGCGTATGTGTCTCTGGCATTGGGCTTTATCTCTGGTTGCATAGGCAGTTTGGTGATGGTGGGTGCCAGGGGAATTTGGGGGCCACTGTTTAGCCATGATAGGGGAATTATAAAGGGAGTAAATAAGGCAATGCTGCTGATGGCTCTGGTGGAAGTGTTTAATTTTCCGTTGGCAGTTTGTGGAGGCATAGTTCGAGGAACAGCACGACCTTGGTTGGGCGCGTATGCGAATCTAGGTGGATTTTATTTCCTGGCCCTTCCACTTGCTATTGTTTTTGCCTTCAAGCTCCGTCTGGGGCTTGTTGGACTCTTCATTGGACTTCTTACTGGTATAGTTACCTGCTTGACGTTGTTATTGGTATTTATTGCACGGTTAAACTGGGCGGAAGAAGCTGCCAAGGCACAAACACTATCAAGCAAAGAGCAGGTTAAGGAACTCCCCAAATATGACGCAGAAAAACGAATAGACGTCCGTGAAAAAGATTAA 1527 0.4623 MSATCKLGDNLSLNDETNQPFSPPPPLHAQKYAANSVKMMISELRVQRGIALPMVAMNLAWFAKTAITTAFLGRLGELSLAGGALGFTFANVTGFSVLNGLCGAMEPICGQAHGAKNFRLLHKTLFMTILLLLLVSLPITFLWLNVDKILIHFGQQQDISIVARTYLSSLIPDLFVASLFCPLKAYLSSQSITLPTMFSSVVALAFHIPVNIVLSKTMGLRGVSMAVWITDLIVVVLLAIYVLILENKKGSMWKEGGWWDQSIEDWIRLVKLCGSCCLNTCLEWWCYEILVLLTGHLTNAKQEVGVLAIVLNFDYLLFSVMLSLATCVSTRVSNELGANQAGLAYRSAYVSLALGFISGCIGSLVMVGARGIWGPLFSHDRGIIKGVNKAMLLMALVEVFNFPLAVCGGIVRGTARPWLGAYANLGGFYFLALPLAIVFAFKLRLGLVGLFIGLLTGIVTCLTLLLVFIARLNWAEEAAKAQTLSSKEQVKELPKYDAEKRIDVREKD 508
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco4g00386 508 MobiDBLite consensus disorder prediction 1 26 - -
Phco4g00386 508 MobiDBLite consensus disorder prediction 1 18 - -
Phco4g00386 508 Pfam MatE 276 437 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Phco4g00386 508 Pfam MatE 53 212 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Phco4g00386 508 PANTHER MULTIDRUG RESISTANCE PROTEIN 38 474 - -
Phco4g00386 508 CDD MATE_eukaryotic 43 480 IPR045069 GO:0042910|GO:1990961
Phco4g00386 508 NCBIfam MATE family efflux transporter 53 450 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco4g00386 Phco-Chr4 2526961 2528487 Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco4g00386 4 2526961 2528487 Phco4g00386 4 2526961 2528487 ECH