Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco4g00385 ATGGATCCTATAACAACACACGCCCATTCTCTTCCACCTCCTTTCCACGCAGGAAGAGATCTCCACCTGCACCACCAACACCAGTTTCACTCCTTACAACAAAACACGGAAGACGAACAAAGCGGAAGCAGCGGAGGCCTAAACATGGCTCACAAAAGAGAACGTGAAGAAAACAGAACCACCAACAGCAATAACAGTGAAGGAAAGGAAGGAGGAGGTGGCGGCTCCGGCGAAACCGAGATGTCAAGAAGACCTCGCGGAAGACCCGCAGGATCCAAGAACAAGCCCAAACCCCCAATCATCATCACGCGCGACAGCGCCAACGCGCTCAAAACTCACGTCATGGAAGTCGCCGACGGCTGTGATATCGTCGACAGCGTCTCCACCTTCGCCCGCCGCCGCCAGCGAGGCGTTTGCATCATGAGCGGCACCGGAACCGTCACCAATGTTACCCTGCGCCAACCCGCTTCTTCCGGCGCCGTCGTCACGCTCCACGGAAGGTTCGAGATCTTGTCCCTCGCCGGATCCTTCCTCCCGCCTCCTGCGCCGCCCGCCGCTACTGGTTTGACGATATACCTAGCTGGAGGACAAGGGCAGGTAGTAGGAGGAAGCGTGGTTGGCGCACTCATTGCTTCGGGGCCTGTGGTTATCATGTCAGCTTCGTTCAGCAACGCTGCGTATGAGAGACTTCCGTTGGAAGAAGAAGACCCTTCGATGCCGCTTCAGGGAGGTTCGATTGGGTCACCCGGCGGTGGAGGCGGCGTTGGTCAACCGCAGACACCTCAGCAGCTTCTGGGGGATTCCACTGCTCCTCTTTTTCACAGTTTGAATCCGAATCTTCTGAATTCCGTTCAGATGCCTTCGGAAACGTTCTGGGCAACGGCTTTTTTTGGGTGGGTCGGGTACGTACGTAGCAAGAGATTCACCAAACTGTCGTGTTACGAAAAGCTAGGGAATAGTGATGCTAAGTTGAACCAACGTGCCATTCAGTTCTTATTCATTGAATCATTGCATTGTTCTCGTTTTTCTGTGTTGCCTGTTGTATCACCGCAGCATGAAGCAGTTCTGCAACCAAAGAACAATGGTTTTGGGGATCTCGCATTTCTCAACTCAAGGTAA 1119 0.5389 MDPITTHAHSLPPPFHAGRDLHLHHQHQFHSLQQNTEDEQSGSSGGLNMAHKREREENRTTNSNNSEGKEGGGGGSGETEMSRRPRGRPAGSKNKPKPPIIITRDSANALKTHVMEVADGCDIVDSVSTFARRRQRGVCIMSGTGTVTNVTLRQPASSGAVVTLHGRFEILSLAGSFLPPPAPPAATGLTIYLAGGQGQVVGGSVVGALIASGPVVIMSASFSNAAYERLPLEEEDPSMPLQGGSIGSPGGGGGVGQPQTPQQLLGDSTAPLFHSLNPNLLNSVQMPSETFWATAFFGWVGYVRSKRFTKLSCYEKLGNSDAKLNQRAIQFLFIESLHCSRFSVLPVVSPQHEAVLQPKNNGFGDLAFLNSR 372
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco4g00385 372 CDD DUF296 111 178 IPR005175 -
Phco4g00385 372 MobiDBLite consensus disorder prediction 27 101 - -
Phco4g00385 372 MobiDBLite consensus disorder prediction 236 268 - -
Phco4g00385 372 MobiDBLite consensus disorder prediction 49 63 - -
Phco4g00385 372 ProSiteProfiles PPC domain profile profile. 107 244 IPR005175 -
Phco4g00385 372 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 44 293 IPR014476 GO:0003680
Phco4g00385 372 FunFam AT-hook motif nuclear-localized protein 110 237 - -
Phco4g00385 372 SUPERFAMILY AF0104/ALDC/Ptd012-like 107 236 - -
Phco4g00385 372 Gene3D - 110 238 - -
Phco4g00385 372 MobiDBLite consensus disorder prediction 28 47 - -
Phco4g00385 372 Pfam Plants and Prokaryotes Conserved (PCC) domain 111 224 IPR005175 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco4g00385 Phco-Chr4 2508155 2509712 Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco4g00385 4 2508155 2509712 Phco4g00385 4 2508155 2509712 ECH