Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco4g00363 ATGGCTCATTTGGTTTACGGTGAAACTCCATCTTTTGGAGCTTCACACCATGGACAGGCTCAGCAAACTATTCCGTTTCCAACCACTGCAACTTCCTTAAAGATTCTGCTCTTACATGGCAACTTGGAAATATGGGTCAACGAGGCTACAAACCTTCCCAACATGGACATGTTTCACAAGAAAACGGGAGAAATGGTTTCCATGTTGTCCCGAAAACTTGGCGGCAAAATCGAAGGCGTCATGTCCAAAACTGGAACCAGTGATCCCTATGTTACAGTGTCTGTGGCGGGTGCTGTGATTGCCAGAACTTTTGTCATCAGAAACATGGAGAACCCCGTTTGGACGCAGCGTTTCAATGTCCCCGTTGCACACCTTGCTTCTGAAGTCCACTTCGTTGTAAAGGACAGTGATATTGTGGGTTCTCAGATTATTGGAGCAGTGGGTATTCCAGTGGAACAGTTATGTAGTGGCACAAGAGTTGAGGGCTTTTTCCCCATCCTTAGTACTAATGGAAAACCATGTAAAGGTGGAGCAATGTTGAGTTTATCCATTCAGTACACGCCTGTTGAAAAGGTGCCTCTTTATAGCCATGGAGTAGGTGCTGGTCCTGATTATCAAGGGGTACCTGACACATACTTTCCCCTTAGGAAAGGTGGAAAAGTTACACTTTATCAAGATGCTCACGTTCATGAAGGCTGCCTTCCCAGTTTGAAGGTGGATGGGGATGTGAATTATAAGCATGAAAGTTGTTGGCACCACATCTTTGATGCAATAAGTAAGGCTCAACGATTGGTTTATATTGTAGGGTGGTCCGTGTACTACAATGTTAGTCTCATTCGGGATATGGGTGACGGAAAGGCTTACACTTTAGGTGACCTTCTCAAAGCTAAATCACGGGAAGGTGTGAGAGTGTTGCTCCTTGTGTGGGATGATCCCACTTCTGGAAGCATGCTTGGATATAAAAAGGTTGGACTTATGGACACCCATGATGAGGACACTCGCCAGTTTTTCAAGCACTCTTCGGTACAGGTGCTTCTTTGCCCACGAGCTGGTGGAAAGGGACATAGCTTTCTCAAAACGCAGGAAGCTGGAACAATCTATACCCATCATCAGAAGACAGTCATTGTAGATGCTGACGCAGGTCACAATAAAAGAAAGATAGTAGCTTTCATCGGAGGTCTTGATTTGTGTGTGGGTCGATATGATACCCCAAACCATTCCCTCTTTAGGACTTTGCAGACAACACACAAAAATGACTATCATAATCCTAACTTTGAGGGACCTATCACTGGCTGTCCAAGACAACCGTGGCATGATTTGCATTCCCAAGTTGATGGTCCAGCAGCATATGACATCCTCACCAATTTCGAGGAGCGTTGGTTGAGGGCTTTAAAAATGAATAGATTGCGAAAGATGAAAAGTTCGCTTGATGATTCATTGCTTAAAATTGATAGAATCGATGCCATTGTTGGCATTGATAAAGTTTCCTGCCAAAATGAAGATAACCAGGAGATTTGGCACACCCAGGTCTTCCGATCAATTGATTCCAATTCTGTGAAAGGATTTCCAAAGCAATCACAAGATGCTATAAGAAGGAACTTGGTTTGTGGAAAGAATGTACTAATAGACATGAGCATACATTCAGCTTATGTCAAGGCAATTCGAGCGGCCCAAAAGTTCATCTATATTGAGAACCAATACTTTCTTGGCTCATCATATAATTGGGATTCTTACAAAGACCTTGGTGCAAACAACTTAATTCCAATGGAAATTGCATTGAAAATAGCCAGCAAAATCAAACAGCATGAGAGATTCTCTGTGTATATTGTCATTCCTATGTGGCCTGAAGGAGTGCCTAAAAGTAAAACTACTCAGCGGATTCTCTTTTGGCAGTTCAAAACAATGCAAATGATGTATGAAACGGTTTACAAGGCCTTACAGGAGGCTGGGCTTGACAATCAGTATGAGCCACAGGACTACTTGAATTTCTTTTGCCTTGGTAATCGTGAGATCCCTGAAAACGAAAATGTTTCAAATGTTACAAAAACTACTGGAGAAAACATACCCCAGGCACTCACTAAAAAGAACCGAAGATTCATGATTTATGTTCATTCAAAAGGAATGATAGTGGATGATGAATATGTGTTACTGGGGTCTGCAAACATTAACCAGAGATCCATGGAAGGCACCAGAGATACAGAGATAGCAATGGGAGCATATCAGCCTAATCATACTTGGGCAAAGAAGCAATCTAAACCTCGTGGACAGGTGCATGGTTATAGAATGTCACTGTGGAGCGAACATATAGGAAGTGTGGAAGAATGTTTTGAGGAACCAGAGAGGCTTGAGTGTGTAAGGCGGATAAAGTCATTGAGTGAGTCTAACTGGAGACAGTATGCAGCAGATGAGGTAACCGAAATGAAAAGCCATTTATTAAAATATCCTCTTGAAGTTGATTCAAAGGGCAAGGTGAAGCCTCTTTCTGGCTGTGAGACATTCCCAGATGTTGGTGGGAACATAAGTGGCACTTTCACAGTACTCAAAGAAAATCTCACCATCTGA 2562 0.4274 MAHLVYGETPSFGASHHGQAQQTIPFPTTATSLKILLLHGNLEIWVNEATNLPNMDMFHKKTGEMVSMLSRKLGGKIEGVMSKTGTSDPYVTVSVAGAVIARTFVIRNMENPVWTQRFNVPVAHLASEVHFVVKDSDIVGSQIIGAVGIPVEQLCSGTRVEGFFPILSTNGKPCKGGAMLSLSIQYTPVEKVPLYSHGVGAGPDYQGVPDTYFPLRKGGKVTLYQDAHVHEGCLPSLKVDGDVNYKHESCWHHIFDAISKAQRLVYIVGWSVYYNVSLIRDMGDGKAYTLGDLLKAKSREGVRVLLLVWDDPTSGSMLGYKKVGLMDTHDEDTRQFFKHSSVQVLLCPRAGGKGHSFLKTQEAGTIYTHHQKTVIVDADAGHNKRKIVAFIGGLDLCVGRYDTPNHSLFRTLQTTHKNDYHNPNFEGPITGCPRQPWHDLHSQVDGPAAYDILTNFEERWLRALKMNRLRKMKSSLDDSLLKIDRIDAIVGIDKVSCQNEDNQEIWHTQVFRSIDSNSVKGFPKQSQDAIRRNLVCGKNVLIDMSIHSAYVKAIRAAQKFIYIENQYFLGSSYNWDSYKDLGANNLIPMEIALKIASKIKQHERFSVYIVIPMWPEGVPKSKTTQRILFWQFKTMQMMYETVYKALQEAGLDNQYEPQDYLNFFCLGNREIPENENVSNVTKTTGENIPQALTKKNRRFMIYVHSKGMIVDDEYVLLGSANINQRSMEGTRDTEIAMGAYQPNHTWAKKQSKPRGQVHGYRMSLWSEHIGSVEECFEEPERLECVRRIKSLSESNWRQYAADEVTEMKSHLLKYPLEVDSKGKVKPLSGCETFPDVGGNISGTFTVLKENLTI 853
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco4g00363 853 Gene3D C2 domain 35 184 IPR035892 -
Phco4g00363 853 PIRSF PLD_plant 27 853 IPR011402 GO:0004630|GO:0005509|GO:0016020|GO:0046470
Phco4g00363 853 PANTHER PHOSPHOLIPASE D 32 842 IPR015679 -
Phco4g00363 853 Gene3D Endonuclease Chain A 237 481 - -
Phco4g00363 853 Pfam Phospholipase D C terminal 773 843 IPR024632 -
Phco4g00363 853 ProSiteProfiles C2 domain profile. 20 164 IPR000008 -
Phco4g00363 853 SMART C2_3c 41 163 IPR000008 -
Phco4g00363 853 CDD C2_plant_PLD 36 187 - -
Phco4g00363 853 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 699 726 IPR001736 GO:0003824
Phco4g00363 853 SUPERFAMILY Phospholipase D/nuclease 206 465 - -
Phco4g00363 853 SUPERFAMILY Phospholipase D/nuclease 527 782 - -
Phco4g00363 853 FunFam Phospholipase D delta 241 479 - -
Phco4g00363 853 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 38 189 IPR035892 -
Phco4g00363 853 SMART pld_4 365 400 IPR001736 GO:0003824
Phco4g00363 853 SMART pld_4 699 726 IPR001736 GO:0003824
Phco4g00363 853 Pfam Phospholipase D Active site motif 366 400 IPR001736 GO:0003824
Phco4g00363 853 Pfam Phospholipase D Active site motif 700 726 IPR001736 GO:0003824
Phco4g00363 853 Gene3D Endonuclease Chain A 488 752 - -
Phco4g00363 853 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 365 400 IPR001736 GO:0003824
Phco4g00363 853 FunFam Phospholipase D 513 745 - -
Phco4g00363 853 Pfam C2 domain 40 166 IPR000008 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco4g00363 Phco-Chr4 2357882 2362593 Dispersed/Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco4g00363 4 2357882 2362593 Phco4g00363 4 2357882 2362593 ECH