Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco4g00333 ATGTTTCGTTCTGCGAGATGGAGGAGCGACAAGAACAGGGTCAAAGCAGTTTTCAAGCTGCATTTCCATGCCACCCAGGTGTTTCAATCTGGAATGGATGCATTGGTGCTGTCTATAGTTCCAGGGGACATTGGAAAGCCAACTACGAAATTGGAGAAAGCTACAGTTCGAGATGGAACTTGCAGATGGGAAATTCCGGTATATGAAACTGTGAAGTTTGTTCAGGAGGCTAAGACTGGGAAAGTCAGTGATAGAATATATCACTTTTTGGTTTCAACGGGTTTACCAAAAGCTAGTTCCATTGGGGAGGTTTCTATAAACTTTGCTAATTATGTGGAAGCCACAAAGCCCTCATCTGTCTCTCTTCCCATCAGGATTTCTCATTGCGATGCTGTTTTGCATGTATCCATTCAGAGGCTGCAAGAAAACGGTGTTCGAAGAGAGGAAGATGAATGCGAAGTTTCCAAACTGAAATCCGATGATAGGAGCTCAAGGAGCCAATTGAACAATGGCGATACGGATGAAACCAGCAAAAGTTTTTCTTCTGAAGATGTCTCTGCCAAAGCAATTATGAATAGAGCTGAATTGAGTTCTAATTACAGGACATCCAGTGGCTCTGATATCACATTGTCAAGTTCTGATGACAGCTCTGGACTTGATACTCCACGCGAAATTGGACCAAGAAAAAAGAACATCCACCTCAACACCAAAGGGTTTCTCCCAGATCCTGTTCTCCACCATGCTTCAGAACCTCAAAACCTTGCTCGCAGTGCCTCAACATCAATGGATGATGTACATCAGAGATCACACTGGGACTGGTCAGCCGGGTCGGAGCACAGGCTAAGTACAGATGATGCAACATATGGTTCTCATCATAATTCTCCTCTGAAGGAACGCTCCCAACAACCTTCCCCTTTAGAGATTGAAAGTCTCAACGCTGAACTAGCTGCTTTGGCCAGGCAGGTGGAGGTGTCGGACTTAGAATTACAGACCCTTAGGAAGCAAATTGTGAAGGAATGCAAAAGAGGGCAGGATCTTACAAAGGAAATTGTTGCCTTGAAAGGGGAAAGGGATGCATTCAAGACAGAATGTGAGAGTCTAAGGTCTTTCCAGAAACGCATGGAAGAGGCCCAAGTCAGAAACAGATCACAGTTGGAAGGTGGAGACCTTCATGCTCTTGTTGAAGAAATAAGACAAGAATTGGATTATGAGAAGGGCCTAAATGCAAATCTCCGGTTACAGTTAAAGAAGATGCAAGAATCTAATGCCGAACTAGTTCTTGCTGTGCAGGACCTGGATGAAATGTTGGAGCAGAAAAATAGTGATATGTGTAACCATTCCTGTGCAAACGAGCGGGATAAAAATTCCCCGGAGAAAAGGATAAACCTCTCTAAATGTGAAACTGATGATGATGATGAAGAACAGAGAGCATTGGAGGAGCTGGTTAAGGAACACACCGAAGCCAAGGAGACACACTTACTTGAGAAGAAAATAGTAGACCTCTACGGTGAAATAGATATGTACAGGAGAGACAAAGAAGAGTTAGAGATGCAGATGGAACAGCTTGCACTGGACTATGAGATATTGAAGCAGGAAAACCATAGCCTTGCACATAAGCTGGAGCAAAGCGAACTGCAAGAACAGCTAAAAATGCAGTATGAATGTTCATCTTCTCCTTCTTCAATGAATGACATTGAAACTCACATCAAGAATCTGGAAAATCAACTAAAGGAACAATCAGAAGATTTCTCAAATTCTCTAGCTACCATCAAGGCACTTGAAACCCATATCAGAAATTTAGAAGAGGAAATGGAGAAGCAAGCTCAAGGATTTGAAGCTGATCTAGAAACAGTGACACGTGAAAAAGTTGAACAAGAACAAAGAGCTATCCAAGCCGAGGAAACATTGCGAAAGACCAGACTTAAAAATGCTCAAACTGCTGAGAGGCTTCAAGAAGAATTCCGAAGACTCTCTACACAAATGACCACCACATTCGATGCGAACGAGAAGGCTACCATGAAAGCATTGACAGAAGCGAGTGAAGTGCGTGCACAGAGAAGTGTACAGGAGGAACAGCTGCATAAAGTAAAAGAAGAACTTGAGTCAACTACTGCTGAGTATGAGGTAAAACTGAACCAACTTTCCAACCAAATAGATATGATGAAAGTGCAGATACAACAGATGTTGTTGGAAATTGAGGACAAGTCCAAACAGATTGAAAATCAGAAGAAGCACGAGGAACAAGTTAGTAGGGATTTCTCTAAAGAGATCGGATTACTAAAAGCTGAGATTGGAAAGCTTAACATGGAGATTTCATGCTTACTTGAGCAAGTAGAAGATAAAGAAATTTTAAGAGCTGACTTGGAACTTATGAAGAAATCAGTTGACGAATTTGAGACACTTTTACAGAAAGGAACTGTGGAAAGAAATGAACTGTTGGGAACAATTAAATTGCTGAAGAAGGAGGCAGAAGAGTCACTTAATGAGCTAAACAGAATGATACATATCAAGGATGAAAAAGAAACTGAGGTCAGAGTCTTGCAATCAGAGTTGGAAGCCCTTAGAGCTCAGTACAATGACCTGAAACTCTCTTTTTCTAAGGACGAAGTGGAGAAAGAAAAACTGCTAAAGCAAGTTTTCCAGCTAAAGGGTGAATTGAAGAAGAAAGATGATGCTTTAGTCAGCTCCGAGAAGAAGTTTAGGGAAAGTAATGCACGCGCAACACTTACCGATGGAACTACAAATATTCTAAAGAACAAAAAAACTGCTTCAGGTCCTCAGAATTCAAAGGAAATAGCCAGTCTGAGGGAGAAAATAAAAACGCTTGAGGGCTTGATACAGACAAAGGAAACAACATTGAAAACTTCAACAACTTCATTTTTGGAGAAGGAAAAGGAACTCCAGACCAAAATTGAGGAGCTGGAGAACAAAGTAGAGGAGTTCAACCGAAGTATTGCTTTGCAGAAGGTGGTTCAGGATACAAGTATTACTACTTCCAGTGAGATATCTGGAGACTTAAGGAGTACAGTTGTGCATCTCAATGCTGCTAAATTGTTATTCAAGAGTGAGGAAAAGTTGCCAGAGAAGAAAGAAGCAGGAATCTCCATAGACGATGCTGCAGATAGCAGCCATGGTGATATATTAACTGAGCTAACATCGTTGAAGGAAAGAAACAAATCGATGGAAAGCGAACTCAAAGAGATGCAAGAGAGATACTTAGAAATGAGCCTCAATTTTGCGGAGGTAGAAGGTGAAAGACAAAAGCTTGTCATGACTGTACGGAATCTTAAGAGTATCCAGAAAGGCTAA 3309 0.4149 MFRSARWRSDKNRVKAVFKLHFHATQVFQSGMDALVLSIVPGDIGKPTTKLEKATVRDGTCRWEIPVYETVKFVQEAKTGKVSDRIYHFLVSTGLPKASSIGEVSINFANYVEATKPSSVSLPIRISHCDAVLHVSIQRLQENGVRREEDECEVSKLKSDDRSSRSQLNNGDTDETSKSFSSEDVSAKAIMNRAELSSNYRTSSGSDITLSSSDDSSGLDTPREIGPRKKNIHLNTKGFLPDPVLHHASEPQNLARSASTSMDDVHQRSHWDWSAGSEHRLSTDDATYGSHHNSPLKERSQQPSPLEIESLNAELAALARQVEVSDLELQTLRKQIVKECKRGQDLTKEIVALKGERDAFKTECESLRSFQKRMEEAQVRNRSQLEGGDLHALVEEIRQELDYEKGLNANLRLQLKKMQESNAELVLAVQDLDEMLEQKNSDMCNHSCANERDKNSPEKRINLSKCETDDDDEEQRALEELVKEHTEAKETHLLEKKIVDLYGEIDMYRRDKEELEMQMEQLALDYEILKQENHSLAHKLEQSELQEQLKMQYECSSSPSSMNDIETHIKNLENQLKEQSEDFSNSLATIKALETHIRNLEEEMEKQAQGFEADLETVTREKVEQEQRAIQAEETLRKTRLKNAQTAERLQEEFRRLSTQMTTTFDANEKATMKALTEASEVRAQRSVQEEQLHKVKEELESTTAEYEVKLNQLSNQIDMMKVQIQQMLLEIEDKSKQIENQKKHEEQVSRDFSKEIGLLKAEIGKLNMEISCLLEQVEDKEILRADLELMKKSVDEFETLLQKGTVERNELLGTIKLLKKEAEESLNELNRMIHIKDEKETEVRVLQSELEALRAQYNDLKLSFSKDEVEKEKLLKQVFQLKGELKKKDDALVSSEKKFRESNARATLTDGTTNILKNKKTASGPQNSKEIASLREKIKTLEGLIQTKETTLKTSTTSFLEKEKELQTKIEELENKVEEFNRSIALQKVVQDTSITTSSEISGDLRSTVVHLNAAKLLFKSEEKLPEKKEAGISIDDAADSSHGDILTELTSLKERNKSMESELKEMQERYLEMSLNFAEVEGERQKLVMTVRNLKSIQKG 1102
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco4g00333 1102 Coils Coil 471 491 - -
Phco4g00333 1102 Coils Coil 957 991 - -
Phco4g00333 1102 MobiDBLite consensus disorder prediction 198 246 - -
Phco4g00333 1102 MobiDBLite consensus disorder prediction 198 219 - -
Phco4g00333 1102 Coils Coil 809 864 - -
Phco4g00333 1102 Coils Coil 562 642 - -
Phco4g00333 1102 ProSiteProfiles C2 NT-type domain profile. 6 141 IPR019448 -
Phco4g00333 1102 MobiDBLite consensus disorder prediction 169 185 - -
Phco4g00333 1102 MobiDBLite consensus disorder prediction 282 304 - -
Phco4g00333 1102 Coils Coil 1051 1085 - -
Phco4g00333 1102 PANTHER MYOSIN HEAVY CHAIN-RELATED PROTEIN 1 1101 - -
Phco4g00333 1102 MobiDBLite consensus disorder prediction 144 185 - -
Phco4g00333 1102 Coils Coil 679 749 - -
Phco4g00333 1102 Coils Coil 932 952 - -
Phco4g00333 1102 Coils Coil 498 546 - -
Phco4g00333 1102 Coils Coil 408 438 - -
Phco4g00333 1102 Pfam N-terminal C2 in EEIG1 and EHBP1 proteins 11 143 IPR019448 -
Phco4g00333 1102 MobiDBLite consensus disorder prediction 144 168 - -
Phco4g00333 1102 Coils Coil 308 335 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco4g00333 Phco-Chr4 2125148 2129920 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco4g00333 4 2125148 2129920 Phco4g03272 4 53302637 53307459 PCT