Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco4g00316 ATGAGAAGAATTTTTAAAATAAAAAAAGAACAAAGAAACTCAACCTATGCTGTCGGTGTGGTTGGTTCATACTCCGAAAGGTCCTGGTGGAAGAGAAGAGAGGCTGAGGTAACTGCGACGACATTTCTTCAGCAGGTAGATGAAATGAGGCATGTGAAGCCCTTGCAGTTGTTTCAGGATTTGACGAATTCAACCCAGAAGCAACGCGGAAGGTTGCTTGGTTTGGATGTCGGGGAGAAATATGTTGGCCTTGCTCTTTCTGACTTTGACAACAAAATTGCTTCACCTTTCAGCGTTCTCGTCAGGAAGAAGTCAAATATTAGTTTAATGGCTTCTGATTTTGCGAATCTGATATCTAAATATTCCCTGGAGGGCTTTGTTGTTGGCCTCCCTTTTGACAAACATAGGGTGTCTTCTGATGCTGGGCTAGTGAAGGTCTTAATTAATCACCTCAGTAGAACAAAAATGCTTGAAGGAGTAAAGTATACATATTGGAATGAGTGCTTCACGTCAAAGAATGTGGAATTGCTGTTAAAGCCTTTGAACTTGAATCATCCAGTACTCTCCAAGACTATTCTAGACAAGTTTGCAGCCGTAGGAATACTTCAAGGGTACCTGGATTTTGTCAACAGGAAAATGAAGCTGACAGCAATGGAGTGTAGGCATGGATCACAAATCACAACTACCTCTGAATTAAAGGTTGGTTGGAGGGCAGTATGA 720 0.4167 MRRIFKIKKEQRNSTYAVGVVGSYSERSWWKRREAEVTATTFLQQVDEMRHVKPLQLFQDLTNSTQKQRGRLLGLDVGEKYVGLALSDFDNKIASPFSVLVRKKSNISLMASDFANLISKYSLEGFVVGLPFDKHRVSSDAGLVKVLINHLSRTKMLEGVKYTYWNECFTSKNVELLLKPLNLNHPVLSKTILDKFAAVGILQGYLDFVNRKMKLTAMECRHGSQITTTSELKVGWRAV 239
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco4g00316 239 Hamap Putative pre-16S rRNA nuclease [yqgF]. 70 210 IPR005227 GO:0006364
Phco4g00316 239 Pfam Holliday junction resolvase 71 207 IPR005227 GO:0006364
Phco4g00316 239 PANTHER POLYNUCLEOTIDYL TRANSFERASE, RIBONUCLEASE H-LIKE SUPERFAMILY PROTEIN 31 217 IPR005227 GO:0006364
Phco4g00316 239 SUPERFAMILY Ribonuclease H-like 70 209 IPR012337 -
Phco4g00316 239 CDD YqgF 72 207 IPR005227 GO:0006364
Phco4g00316 239 SMART rnase_8s 70 174 IPR006641 GO:0006139
Phco4g00316 239 Gene3D - 69 217 IPR037027 GO:0006139
Phco4g00316 239 FunFam Putative pre-16S rRNA nuclease 69 217 - -
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco4g00316 4 2015804 2019288 Phco4g00316 4 2015804 2019288 ECH