Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco4g00308 ATGGCTTCGGAAAAGATCTGCTCGATTCTATTATTTTCTGCAGTCATATTGCTTCTCCGTGACGCCCCTTCTGTCTTAGCTGGGGACATAGTTCACGACGACGATTCAACACCCAAGAAGCCGGGTTGCGAGAATCAGTTCGTTCTGGTAAAGGTGCAAACCTGGGTCAACGGTGTAGAGGATGCTGAATTTGTTGGTGTGGGTGCCAGATTTGGCAGAGCCATTGTGTCAAAAGAGAAAAATGCAAGACATACACGCCTTATTCTTTCAGATCCTCGTGACTGTTGCAGCCCGCCAAAGAATAAGATAGTGGGAGATGTCATCATGGTGGATCGAGGCAACTGTACATTCACAAGAAAGGCAAATACTGCACAGAATGCTAATGCTTCAGCCATCCTCATTATAAATAACCAAAAAGAACTTTACAAGATGGTTTGCGATCCTGATGAAACTGATTTGAACATACATATACCTGCAGTCATGCTTCCACTAGATGCAGGTACAAGGCTGGAAAAAATGCTGACAAGTACTTCATCTGTGTCTGTGCAGCTATACTCACCACGTAGACCATCTGTTGACATAGCAGAAGTATTTCTTTGGATGATGGCAGTTCTTACCATATTGTGTGCATCATATTGGTCAGCTTGGACAGCCCGAGAATCAGCTATTGAACAAGATAAGCTCCTAAAGGATGCTTCAGATGAAATCCCAAACACTAAATATGCTAATGTTAATGGAGTTGTAAATATGAACGTGAAAGCTGCAGTCCTTTTTGTTGTATTTGCTTCATGTTTCCTGTTTATGCTTTACAAACTGATGTCGTCGTGGTTCATTGAGGTTTTGGTTGTTCTCTTCTGTATTGGTGGGATTGAGGGCTTGCAAACTTGCTTGGTTGCTCTTTTGTCCAGGTGGTTCAAACATGCTGGAGAGGCATACATCAAAGTACCTTTCTTGGGATCTATCTCATACCTGACTTTGGCTGTTTCTCCATTCTGTACAACATTTGCCGTTCTTTGGGCCGTTTATCGTAACAATTCCTTTGCCTGGATTTGTCAAGATATACTCGGAATTGCACTGATTATAACAGTTCTACAGATTGTACATGTACCAAATCTTAAGGTTGGTACCGTTCTTCTCGGCTGTGCCTTCATCTACGACATCTTTTGGGTGTTTGTCTCAAAGAAGTTCTTCAAGGAAAGTGTCATGATTGTGGTAGCCCGAGGTGATCGAAGTGGAGAAGATGGAATTCCAATGTTACTAAAGTTCCCACGTATTTTTGATCCATGGGGTGGCTACAGCATCATTGGTTTTGGAGACATCCTTTTACCTGGAATGCTGGTGGCATTCTCACTCAGGTACGATTGGCTGGCAAACAAGAGCCTTAGAGGTGGATATTTCCTGTGGGCAATGTTTGCATATGGCTTTGGTCTTTTAATTACGTACGTGGCACTAAACTTGATGGACGGACATGGCCAACCAGCACTATTATACATCGTTCCATTTACCCTTGGAACCTTGATGACATTGGGGCAGAAGCGAGGAGATTTGAGGGGATTGTGGACAAGTGGAGAACCTCAAAAACCCTGCCCACATTTAAGACTCCAACATAGTGGAGAATTAAGCCTTGAATGA 1632 0.4314 MASEKICSILLFSAVILLLRDAPSVLAGDIVHDDDSTPKKPGCENQFVLVKVQTWVNGVEDAEFVGVGARFGRAIVSKEKNARHTRLILSDPRDCCSPPKNKIVGDVIMVDRGNCTFTRKANTAQNANASAILIINNQKELYKMVCDPDETDLNIHIPAVMLPLDAGTRLEKMLTSTSSVSVQLYSPRRPSVDIAEVFLWMMAVLTILCASYWSAWTARESAIEQDKLLKDASDEIPNTKYANVNGVVNMNVKAAVLFVVFASCFLFMLYKLMSSWFIEVLVVLFCIGGIEGLQTCLVALLSRWFKHAGEAYIKVPFLGSISYLTLAVSPFCTTFAVLWAVYRNNSFAWICQDILGIALIITVLQIVHVPNLKVGTVLLGCAFIYDIFWVFVSKKFFKESVMIVVARGDRSGEDGIPMLLKFPRIFDPWGGYSIIGFGDILLPGMLVAFSLRYDWLANKSLRGGYFLWAMFAYGFGLLITYVALNLMDGHGQPALLYIVPFTLGTLMTLGQKRGDLRGLWTSGEPQKPCPHLRLQHSGELSLE 543
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco4g00308 543 Gene3D - 32 187 - -
Phco4g00308 543 FunFam Signal peptide peptidase-like 3 49 188 - -
Phco4g00308 543 PANTHER SIGNAL PEPTIDE PEPTIDASE 75 528 IPR007369 GO:0004190|GO:0016020
Phco4g00308 543 Pfam PA domain 96 170 IPR003137 -
Phco4g00308 543 SMART psh_8 246 513 IPR006639 GO:0004190|GO:0016020
Phco4g00308 543 Pfam Signal peptide peptidase 247 524 IPR007369 GO:0004190|GO:0016020
Phco4g00308 543 SUPERFAMILY PA domain 102 178 IPR046450 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco4g00308 Phco-Chr4 1950959 1956700 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco4g00308 4 1950959 1956700 Phco4g00308 4 1950959 1956700 ECH