Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco4g00279 ATGAACGGGGTGGCGGGGTTGCCATTGCCACCAAATTCGTCGCCATCTGTGATCAACATGTATAGAATCAACAGAGTTGTGGAGCGTTTGGCTTGGCTTGCTCAACCTGGCAACCGAGGCGATCCTAAAGAATTTTATAACCACTGCCTCTCCCTCTCTCGAGGCATTGATTATGCACTTGCGAATGGGGAAATTCCAGGCAATGCTCATGAGCTTCCTTTGCTGGTGAAGCAGATTTGTCAACTAAAGAATGATGAACTTTCACAAGCTGCTCTGATGGTGTTGATGATATCTGTAAAGAGTGCCTGTGAAATTGGATGGTTCCAATCGAAAGAATCAGAAGAACTTCTTACTATTGTGGATGAGATCGGAAAAGTCTACAGCAATGTGGGGACTATTAATGCTAGACCTAGACAGTGCAGTTCTGAAATATCAACAATAATGGAGAAGTTCTACCCTAATGTTAAATTGGGTTCAATACTTGCGTCAATTGAGGTCCAGCCTGGATATGGAGCTTCTGTGGTCGATTTTCATATTACAAAGAGTGAATTTGTTAAAGACAAAATTTTTTTATTGGTGGCACAGATAGATAACATAGAGATATCTGCATGCCTCATAAGTCCTCAGCAAGTGAATTTTCTCCTCAATGGAAAAGGAGTAATCAATAGGACTAATGTTCAAATGGATCCTGGACCACAAATGCCAACTGATGTGACTGGTATGCTTAAATTTGGGACAAATCTTCTTCAAGCTGTGGGCCAGTTCAATGGTCGTTACACTGTACTCGTTGCTTATATGAGTTTTACACCCTTGCATGAAGATCCAGTACTTCAAGATTATCTCCAGCCTGTTGTTACCTCTGTTGATTCTGATTCGGATATTATTGAGGGGGCTTCACAGATTTCGCTAAATTGTCCAATAAGCTTTACACGTATTAATACTCCTGTTAAAGGGCGATCATGCAAACATTTCCAGTGTTTTGACTTTAACAACTTCATTAGTATCAATTCAAAAAGGCCATCCTGGCGCTGCCCTCATTGCAATCAGTATGTCTGTTATGCTGATATTCGACTTGACCGAAACATGGTTGAGATCCTGAAAAATGTTGGTGAGAGCATTACGGAAGTGATTGTCCTTGCTGATGGATCTTGGAAGGCAGTCATGGAAAAGGATCACGATGTGGATAAGATGCAAAACAAGGCCCCCAACTATGAAAAAGAACAAACTGAACCCCAAGAATATACTTGCTCTCCTGCCACTGTTGACCTCACCGAAGATGATGATCATTTGGAGACAATGGACTGTTCTGAAATTGTAGATAGAAAACCTTTCCAGGCATCTGTTCAAAGTCAGTTTGTCGCTCCAAATTCAACTTCCTTGGGTATGAACTCTCCTGGTGTTAATCGAAATGTTGCTGCTCAAATAGATGACTTTTTGTCTGGGGTTTATGTTGCCCGTAATAGGTCTGATGCCCCAATGGTTGGTACCTCTGAGCTACCTGTTCTGCTTGATACTGTTTCTCCAGCATTTAATCAGGAATCTGCAGGTCGTGACAATAACTCTGCTGTTAACTCTGCCATGCGTAATCAATTTTCGGCACCAGACAATTTGCAGATGCAGATGAATCATATGAATTCAGTTAACGAGTATGGTAGGTCATCCTCAGTGCCAAGACATATTACTAGAACTCCAGTAGCTGTTCAGGCCCTCCCAGTCCAATCCCAGGCATTGGGTTTAAATAATCCCCTGCTATCAAGCAATTCCTCTTCTTCTCATATTTATATGCCCAGCTCTACTACTGTAGATACTTTGAAAGCCATACTAAGTGATACTGAAAGACAGCAACGTTTTTCTCGGTCCCCAATGAATCTGCCTCAGGTCTCAGGTGTGAATTCACCTGCATTTCGGCATAACAGTGCAACACAGAATCGGGTACAAGTAAAGAACACATCAACACCAACTCAATTGCAGAACCAATTCAGATCTGGTTCGTTATCTGATTTTGGAAATTCACACCTGCAGCAAGCTCTGAATCCTCGGCCACCTCGATTGCCTCTAAATTTCCGACCACCACCACCAATGCGACCATCTACTACCCAATGGTCTCACATCCAGCAAGGTGTTTCACAATCTGGAAATTTACAGGCGGCAGGCAGGTCTGCTGCACCGGCTGCCAGACAAGGTATTTCCCATGCTAGGAATCTTCCTCCAGGTGGTACCACTGCTCATACCCAACAAGCTAGGGGTTTGGCTGCTCATCAGCCTGCTAGACGTACACCACCACTAGTTTCTGTCCAAAATCAAAGCAGTGTTGCAGGCACACCTTTTGCTACTGAGAGTTTCCAGGGGTTGACAGGGGATCAAAAAAGAGGAAACACAGCACAGTCAGTTTCTCGGCCTGATGAATTATTCAGTACGCCATCAGAACAGAATTGGGCTCCCACTGGACGAATGCGTGGAAGTCTAGATTTAAGTCAGCCTTACGATGAGTCTATTGCGCAGCGAATAATTACGCCAACACAAACTCAAACTTCAAGGCCAACACCTCCACAACCTCTCCGACGGGCCACTGGGTCGACCCAACAGGATGTGCTTATTGCTAACAATAGAAATGCAAATGCTCATAATCGTACTTCCAGTTGA 2643 0.4366 MNGVAGLPLPPNSSPSVINMYRINRVVERLAWLAQPGNRGDPKEFYNHCLSLSRGIDYALANGEIPGNAHELPLLVKQICQLKNDELSQAALMVLMISVKSACEIGWFQSKESEELLTIVDEIGKVYSNVGTINARPRQCSSEISTIMEKFYPNVKLGSILASIEVQPGYGASVVDFHITKSEFVKDKIFLLVAQIDNIEISACLISPQQVNFLLNGKGVINRTNVQMDPGPQMPTDVTGMLKFGTNLLQAVGQFNGRYTVLVAYMSFTPLHEDPVLQDYLQPVVTSVDSDSDIIEGASQISLNCPISFTRINTPVKGRSCKHFQCFDFNNFISINSKRPSWRCPHCNQYVCYADIRLDRNMVEILKNVGESITEVIVLADGSWKAVMEKDHDVDKMQNKAPNYEKEQTEPQEYTCSPATVDLTEDDDHLETMDCSEIVDRKPFQASVQSQFVAPNSTSLGMNSPGVNRNVAAQIDDFLSGVYVARNRSDAPMVGTSELPVLLDTVSPAFNQESAGRDNNSAVNSAMRNQFSAPDNLQMQMNHMNSVNEYGRSSSVPRHITRTPVAVQALPVQSQALGLNNPLLSSNSSSSHIYMPSSTTVDTLKAILSDTERQQRFSRSPMNLPQVSGVNSPAFRHNSATQNRVQVKNTSTPTQLQNQFRSGSLSDFGNSHLQQALNPRPPRLPLNFRPPPPMRPSTTQWSHIQQGVSQSGNLQAAGRSAAPAARQGISHARNLPPGGTTAHTQQARGLAAHQPARRTPPLVSVQNQSSVAGTPFATESFQGLTGDQKRGNTAQSVSRPDELFSTPSEQNWAPTGRMRGSLDLSQPYDESIAQRIITPTQTQTSRPTPPQPLRRATGSTQQDVLIANNRNANAHNRTSS 880
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco4g00279 880 MobiDBLite consensus disorder prediction 760 815 - -
Phco4g00279 880 MobiDBLite consensus disorder prediction 683 697 - -
Phco4g00279 880 ProSiteProfiles Zinc finger SP-RING-type profile. 290 371 IPR004181 GO:0008270
Phco4g00279 880 CDD SP-RING_PIAS-like 302 349 - -
Phco4g00279 880 MobiDBLite consensus disorder prediction 669 823 - -
Phco4g00279 880 SUPERFAMILY RING/U-box 301 376 - -
Phco4g00279 880 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 272 386 IPR013083 -
Phco4g00279 880 MobiDBLite consensus disorder prediction 698 717 - -
Phco4g00279 880 MobiDBLite consensus disorder prediction 835 880 - -
Phco4g00279 880 PANTHER ZINC FINGER MIZ DOMAIN-CONTAINING PROTEIN 42 657 - -
Phco4g00279 880 Pfam MIZ/SP-RING zinc finger 301 349 IPR004181 GO:0008270
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco4g00279 4 1770530 1783075 Phco4g00279 4 1770530 1783075 ECH